Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC7.58□□□□□ -1.2
NID1P14543 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 OR52Y1P-201ENST00000452418 828 ntBASIC7.58□□□□□ -1.2
NID1P14543 AL034397.1-201ENST00000456392 908 ntBASIC7.58□□□□□ -1.2
NID1P14543 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.58□□□□□ -1.2
NID1P14543 RN7SL130P-201ENST00000489463 305 ntBASIC7.58□□□□□ -1.2
NID1P14543 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NID1P14543 AC114964.1-201ENST00000502306 1111 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 AC091874.2-201ENST00000505889 720 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC112203.1-201ENST00000506315 1020 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 HSPE1P10-201ENST00000508631 558 ntBASIC7.58□□□□□ -1.2
NID1P14543 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC7.58□□□□□ -1.2
NID1P14543 AC021146.7-201ENST00000509604 775 ntBASIC7.58□□□□□ -1.2
NID1P14543 MTCYBP44-201ENST00000514835 823 ntBASIC7.58□□□□□ -1.2
NID1P14543 RNA5SP460-201ENST00000516789 100 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.58□□□□□ -1.2
NID1P14543 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
NID1P14543 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 AC025252.2-201ENST00000537470 502 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 TPRKBP2-201ENST00000565969 475 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC106734.1-201ENST00000568646 663 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC079171.1-201ENST00000568788 914 ntBASIC7.58□□□□□ -1.2
NID1P14543 ISCA1P3-201ENST00000577104 373 ntBASIC7.58□□□□□ -1.2
NID1P14543 MIR4789-201ENST00000577469 82 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC025198.1-201ENST00000578331 419 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.58□□□□□ -1.2
NID1P14543 AC139085.1-201ENST00000582716 182 ntBASIC7.58□□□□□ -1.2
NID1P14543 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.58□□□□□ -1.2
NID1P14543 AL691432.1-202ENST00000597891 502 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC005377.1-201ENST00000605126 456 ntBASIC7.58□□□□□ -1.2
NID1P14543 AL161729.2-201ENST00000605700 456 ntBASIC7.58□□□□□ -1.2
NID1P14543 AL645933.2-201ENST00000606743 1207 ntBASIC7.58□□□□□ -1.2
NID1P14543 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.58□□□□□ -1.2
NID1P14543 AC009237.15-201ENST00000610252 501 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC016876.3-201ENST00000610459 426 ntBASIC7.58□□□□□ -1.2
NID1P14543 RBM22P4-201ENST00000613117 1240 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC023310.4-201ENST00000613130 650 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC027139.2-201ENST00000615639 448 ntBASIC7.58□□□□□ -1.2
NID1P14543 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC7.58□□□□□ -1.2
NID1P14543 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC7.58□□□□□ -1.2
NID1P14543 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.58□□□□□ -1.2
NID1P14543 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.58□□□□□ -1.2
NID1P14543 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.58□□□□□ -1.2
NID1P14543 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC7.58□□□□□ -1.2
NID1P14543 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
NID1P14543 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
NID1P14543 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
NID1P14543 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NID1P14543 ABCF2P1-201ENST00000465687 1867 ntBASIC7.58□□□□□ -1.2
NID1P14543 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
NID1P14543 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.57□□□□□ -1.2
NID1P14543 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
NID1P14543 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 KYNUP3-201ENST00000574386 1341 ntBASIC7.57□□□□□ -1.2
NID1P14543 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.57□□□□□ -1.2
NID1P14543 AC108099.1-201ENST00000564402 3258 ntBASIC7.57□□□□□ -1.2
NID1P14543 AC091132.4-201ENST00000587960 2262 ntBASIC7.57□□□□□ -1.2
NID1P14543 AL133243.2-201ENST00000610331 1621 ntBASIC7.57□□□□□ -1.2
NID1P14543 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
NID1P14543 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.57□□□□□ -1.2
NID1P14543 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
NID1P14543 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 RNU6-413P-201ENST00000384115 107 ntBASIC7.57□□□□□ -1.2
NID1P14543 U6.112-201ENST00000384129 70 ntBASIC7.57□□□□□ -1.2
NID1P14543 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NID1P14543 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.57□□□□□ -1.2
NID1P14543 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.57□□□□□ -1.2
NID1P14543 FKBP1AP3-201ENST00000423650 319 ntBASIC7.57□□□□□ -1.2
NID1P14543 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC7.57□□□□□ -1.2
NID1P14543 WDR82P1-201ENST00000439836 939 ntBASIC7.57□□□□□ -1.2
NID1P14543 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.57□□□□□ -1.2
NID1P14543 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NID1P14543 RPS29P16-201ENST00000452798 171 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms