Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 RNF2P1-201ENST00000442955 1010 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 RN7SL868P-201ENST00000485915 303 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC118465.1-201ENST00000513820 1271 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 MTATP6P9-201ENST00000515039 680 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC021820.1-201ENST00000525564 808 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 OR4R2P-201ENST00000530815 597 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 SSU72P6-201ENST00000532644 488 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 PHBP2-201ENST00000532859 806 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC139103.1-201ENST00000534696 1030 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 MTND4LP25-201ENST00000570218 163 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 SIGLEC31P-201ENST00000594237 551 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC098483.2-201ENST00000603158 454 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC090912.3-201ENST00000609775 533 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AL121583.1-201ENST00000612444 682 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AL596275.2-203ENST00000641951 371 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AL358913.2-201ENST00000553881 1548 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 MTND4P9-201ENST00000507819 1346 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AL162456.1-201ENST00000634535 2006 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 SETP22-201ENST00000412243 957 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 VPS26BP1-201ENST00000417155 755 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC114402.2-201ENST00000432760 643 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 CHCHD4P5-201ENST00000436684 427 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 ST13P21-201ENST00000453250 1098 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AGKP1-201ENST00000455254 1263 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 MED28P7-201ENST00000456611 530 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 VN1R6P-201ENST00000458417 907 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 RN7SL492P-201ENST00000460700 295 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 RN7SL160P-201ENST00000468558 284 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC017007.1-201ENST00000511960 415 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 RNU2-45P-201ENST00000516068 187 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 RNA5SP318-201ENST00000516352 92 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 Y_RNA.717-201ENST00000517106 92 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 CARSP2-201ENST00000520688 277 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AL591222.2-201ENST00000604443 754 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC140725.3-201ENST00000616193 880 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC005393.1-201ENST00000617916 584 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC004943.1-203ENST00000624370 1074 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC008626.2-201ENST00000624425 248 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AC127071.1-201ENST00000624997 712 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms