Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC026951.2-201ENST00000613847 241 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 RPL12P1-201ENST00000374520 498 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC091492.1-201ENST00000419844 272 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC091390.2-201ENST00000432573 374 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC009237.4-201ENST00000441078 238 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 SCARNA11.1-201ENST00000516918 132 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 OXR1-212ENST00000521592 993 ntTSL 5 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC111186.1-201ENST00000604684 130 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC104184.1-201ENST00000607513 721 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AL161420.1-201ENST00000619393 264 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AC243725.1-201ENST00000637164 436 ntBASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.36□□□□□ -1.07
CHMP4CQ96CF2 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AL359263.1-201ENST00000441188 2796 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AL512353.3-201ENST00000417517 1326 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AP001157.1-201ENST00000550837 2339 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC007998.4-201ENST00000612496 2533 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 RN7SKP38-201ENST00000410782 309 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC009362.1-201ENST00000427253 406 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC114402.2-201ENST00000432760 643 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC083855.1-201ENST00000440041 258 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AL356133.1-201ENST00000444762 372 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 RPSAP48-201ENST00000466509 889 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 RPS16P9-201ENST00000477220 427 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AL591122.1-201ENST00000487348 492 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AP001803.1-201ENST00000525668 147 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 OR9L1P-201ENST00000529493 933 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 SIGLEC31P-201ENST00000594237 551 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 AC132219.2-201ENST00000624416 2327 ntBASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.35□□□□□ -1.07
CHMP4CQ96CF2 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CHMP4CQ96CF2 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.34□□□□□ -1.07
CHMP4CQ96CF2 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHMP4CQ96CF2 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHMP4CQ96CF2 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
CHMP4CQ96CF2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 446 ms