Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 RPSAP42-201ENST00000403415 878 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 HMGN1P14-201ENST00000412459 517 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 UPF3AP1-201ENST00000413731 1126 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC244034.1-201ENST00000428027 792 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL365220.1-201ENST00000432923 399 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC092431.2-201ENST00000441658 318 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC004865.1-201ENST00000442276 1003 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC092634.4-203ENST00000451395 448 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC079382.1-201ENST00000493346 557 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 RPL4P1-201ENST00000496596 1278 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 Y_RNA.695-201ENST00000516715 107 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 SUMO2P19-201ENST00000518920 295 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC104383.1-201ENST00000530297 370 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 VN1R65P-201ENST00000566443 808 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC090616.5-202ENST00000582111 297 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC090616.1-201ENST00000583895 447 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC090616.2-202ENST00000584248 222 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC005616.1-201ENST00000592931 579 ntTSL 4 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC243960.5-201ENST00000597858 255 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL031281.1-201ENST00000604049 488 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL731533.2-201ENST00000607898 578 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC008498.1-201ENST00000613012 531 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC005840.5-201ENST00000619166 599 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL121785.1-201ENST00000624745 708 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 RPSAP68-201ENST00000625020 438 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC006042.3-201ENST00000454684 1469 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 RNU4-92P-201ENST00000363783 136 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 SNORA58.1-201ENST00000364133 136 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 RN7SKP37-201ENST00000364494 296 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 CENPW-201ENST00000368325 528 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AL136310.1-201ENST00000404926 654 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 RN7SKP161-201ENST00000411110 305 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms