Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RHBDL3P58872 CDY11P-201ENST00000447168 1651 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RHBDL3P58872 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 RNA5SP140-201ENST00000364524 92 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 SNORA70.3-201ENST00000365075 132 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 OOSP1-201ENST00000398992 1270 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC8.14□□□□□ -1.11
RHBDL3P58872 RPL24P2-201ENST00000421023 475 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 RFESDP1-201ENST00000422350 461 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 LINC00328-2P-201ENST00000436585 219 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 ARMC4P1-201ENST00000438905 707 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 RPS18P1-201ENST00000447840 458 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 OR52Y1P-201ENST00000452418 828 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 RPS7P10-201ENST00000464254 603 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 DEFB109A-201ENST00000482450 265 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 RN7SL187P-201ENST00000495587 303 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 AC113398.2-201ENST00000507630 558 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 SNRPCP6-201ENST00000528310 210 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 AC025423.2-201ENST00000537570 439 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 CTSLP2-201ENST00000580501 394 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 AC111186.1-201ENST00000604684 130 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 AL359091.2-201ENST00000609303 556 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 AL354702.2-202ENST00000641481 890 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RHBDL3P58872 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RHBDL3P58872 OR4C1P-202ENST00000641065 1569 ntBASIC8.14□□□□□ -1.11
RHBDL3P58872 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RHBDL3P58872 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.14□□□□□ -1.11
RHBDL3P58872 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RHBDL3P58872 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.13□□□□□ -1.11
RHBDL3P58872 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.13□□□□□ -1.11
RHBDL3P58872 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RHBDL3P58872 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 SNORA64.3-201ENST00000365647 134 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 AC240504.1-201ENST00000395709 845 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 VIM2P-201ENST00000402383 1294 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.13□□□□□ -1.11
RHBDL3P58872 MTND4LP21-201ENST00000415303 295 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.13□□□□□ -1.11
RHBDL3P58872 AK3P5-201ENST00000432033 519 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.13□□□□□ -1.11
RHBDL3P58872 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.13□□□□□ -1.11
RHBDL3P58872 FCF1P7-201ENST00000451185 558 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 RBMY2HP-201ENST00000457961 720 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 RPS4XP23-201ENST00000487801 237 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 RN7SL568P-201ENST00000493069 298 ntBASIC8.13□□□□□ -1.11
RHBDL3P58872 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.13□□□□□ -1.11
RHBDL3P58872 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.13□□□□□ -1.11
RHBDL3P58872 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RHBDL3P58872 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.13□□□□□ -1.11
RHBDL3P58872 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.13□□□□□ -1.11
RHBDL3P58872 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC8.13□□□□□ -1.11
RHBDL3P58872 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC8.13□□□□□ -1.11
RHBDL3P58872 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.13□□□□□ -1.11
RHBDL3P58872 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.13□□□□□ -1.11
RHBDL3P58872 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms