Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 BOLA2P1-201ENST00000584794 232 ntBASIC6.49□□□□□ -1.37
CLRN1P58418 NDUFA3P1-201ENST00000588007 252 ntBASIC6.49□□□□□ -1.37
CLRN1P58418 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.49□□□□□ -1.37
CLRN1P58418 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.49□□□□□ -1.37
CLRN1P58418 uc_338.33-201ENST00000614988 170 ntBASIC6.49□□□□□ -1.37
CLRN1P58418 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.49□□□□□ -1.37
CLRN1P58418 Z99129.2-201ENST00000619967 314 ntBASIC6.49□□□□□ -1.37
CLRN1P58418 AC007275.1-201ENST00000621243 671 ntBASIC6.49□□□□□ -1.37
CLRN1P58418 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.49□□□□□ -1.37
CLRN1P58418 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CLRN1P58418 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.49□□□□□ -1.37
CLRN1P58418 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CLRN1P58418 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.49□□□□□ -1.37
CLRN1P58418 AC010168.2-201ENST00000562691 5428 ntBASIC6.49□□□□□ -1.37
CLRN1P58418 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.49□□□□□ -1.37
CLRN1P58418 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLRN1P58418 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 AL449283.1-201ENST00000602631 3403 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 ZNF840P-201ENST00000504759 1996 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 RNA5SP218-201ENST00000363188 109 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC244452.1-201ENST00000413798 141 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC009237.9-201ENST00000414800 347 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.48□□□□□ -1.37
CLRN1P58418 AL390840.1-201ENST00000420303 988 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC009506.2-201ENST00000420635 840 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 FDPSP8-201ENST00000438304 1089 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 MTND1P33-201ENST00000446251 917 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 MTCO2P6-201ENST00000463134 685 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 RN7SL791P-201ENST00000467868 295 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 RN7SL282P-201ENST00000479676 297 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 RN7SL647P-201ENST00000485429 300 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 RN7SL423P-201ENST00000486202 304 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC008967.1-201ENST00000504843 163 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC024451.1-201ENST00000508013 779 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 PRELID3BP5-201ENST00000508612 460 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.48□□□□□ -1.37
CLRN1P58418 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 ST13P6-201ENST00000522430 1102 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 IGLVI-42-201ENST00000522485 381 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 EEF1A1P37-201ENST00000522748 715 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC021451.1-201ENST00000523498 1129 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC087257.2-201ENST00000538759 928 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.48□□□□□ -1.37
CLRN1P58418 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.48□□□□□ -1.37
CLRN1P58418 COX6CP11-201ENST00000555293 229 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC233266.2-201ENST00000567067 528 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.48□□□□□ -1.37
CLRN1P58418 SETP3-201ENST00000581726 813 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 MTCO2P2-201ENST00000591258 225 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC069431.2-201ENST00000604149 1099 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.48□□□□□ -1.37
CLRN1P58418 AC004775.1-201ENST00000607389 753 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AL137246.2-201ENST00000613439 662 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 MIR8084-201ENST00000614105 89 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC120349.3-201ENST00000624377 529 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.48□□□□□ -1.37
CLRN1P58418 AL353898.3-201ENST00000624679 1755 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.48□□□□□ -1.37
CLRN1P58418 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.48□□□□□ -1.37
CLRN1P58418 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms