Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.31□□□□□ -1.24
NEK3P51956 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NEK3P51956 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
NEK3P51956 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.31□□□□□ -1.24
NEK3P51956 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NEK3P51956 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NEK3P51956 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
NEK3P51956 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
NEK3P51956 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NEK3P51956 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
NEK3P51956 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NEK3P51956 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.31□□□□□ -1.24
NEK3P51956 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NEK3P51956 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NEK3P51956 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.3□□□□□ -1.24
NEK3P51956 AC020978.6-201ENST00000571197 3177 ntBASIC7.3□□□□□ -1.24
NEK3P51956 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 AC022417.1-201ENST00000624768 1303 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NEK3P51956 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NEK3P51956 AC024937.2-201ENST00000411669 1242 ntBASIC7.3□□□□□ -1.24
NEK3P51956 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.3□□□□□ -1.24
NEK3P51956 AL662791.3-201ENST00000413771 776 ntBASIC7.3□□□□□ -1.24
NEK3P51956 VN1R31P-201ENST00000417498 730 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.3□□□□□ -1.24
NEK3P51956 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.3□□□□□ -1.24
NEK3P51956 CYCSP44-201ENST00000448560 313 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.3□□□□□ -1.24
NEK3P51956 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 RPL23P10-201ENST00000468780 412 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC026254.2-201ENST00000475295 371 ntBASIC7.3□□□□□ -1.24
NEK3P51956 RPL21P42-201ENST00000488408 464 ntBASIC7.3□□□□□ -1.24
NEK3P51956 RN7SL775P-201ENST00000498361 336 ntBASIC7.3□□□□□ -1.24
NEK3P51956 TECRP2-201ENST00000503270 928 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.3□□□□□ -1.24
NEK3P51956 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC7.3□□□□□ -1.24
NEK3P51956 RPL10P18-201ENST00000519384 309 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC009879.1-201ENST00000520029 839 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.3□□□□□ -1.24
NEK3P51956 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 OR5BK1P-201ENST00000550421 823 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC009283.1-201ENST00000615852 645 ntBASIC7.3□□□□□ -1.24
NEK3P51956 AC009032.1-201ENST00000617574 431 ntBASIC7.3□□□□□ -1.24
NEK3P51956 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 AP003108.4-201ENST00000623917 878 ntBASIC7.3□□□□□ -1.24
NEK3P51956 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC7.3□□□□□ -1.24
NEK3P51956 OR7E161P-202ENST00000641994 1033 ntBASIC7.3□□□□□ -1.24
NEK3P51956 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
NEK3P51956 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.3□□□□□ -1.24
NEK3P51956 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.3□□□□□ -1.24
NEK3P51956 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
NEK3P51956 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.3□□□□□ -1.24
NEK3P51956 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.3□□□□□ -1.24
NEK3P51956 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
NEK3P51956 AC008957.3-201ENST00000624112 2242 ntBASIC7.29□□□□□ -1.24
NEK3P51956 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
NEK3P51956 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NEK3P51956 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
NEK3P51956 OR51C1P-202ENST00000641159 1444 ntBASIC7.29□□□□□ -1.24
NEK3P51956 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.29□□□□□ -1.24
NEK3P51956 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NEK3P51956 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 AL139100.1-201ENST00000408001 498 ntBASIC7.29□□□□□ -1.24
NEK3P51956 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 MICG-208ENST00000416822 132 ntBASIC7.29□□□□□ -1.24
NEK3P51956 RPL36P18-201ENST00000419316 318 ntBASIC7.29□□□□□ -1.24
NEK3P51956 AC134879.1-201ENST00000426062 394 ntBASIC7.29□□□□□ -1.24
NEK3P51956 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms