Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC022306.3-201ENST00000619930 550 ntBASIC6.14□□□□□ -1.43
SOX2P48431 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.14□□□□□ -1.43
SOX2P48431 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX2P48431 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 UGT2B27P-201ENST00000505092 1620 ntBASIC6.14□□□□□ -1.43
SOX2P48431 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SOX2P48431 AC078880.4-201ENST00000617627 1749 ntBASIC6.13□□□□□ -1.43
SOX2P48431 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.13□□□□□ -1.43
SOX2P48431 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 AC112243.1-201ENST00000623949 3851 ntBASIC6.13□□□□□ -1.43
SOX2P48431 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX2P48431 FOLH1B-202ENST00000529567 2145 ntBASIC6.13□□□□□ -1.43
SOX2P48431 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 RNU1-21P-201ENST00000363327 163 ntBASIC6.13□□□□□ -1.43
SOX2P48431 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 SNORA35-201ENST00000386104 128 ntBASIC6.13□□□□□ -1.43
SOX2P48431 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SOX2P48431 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SOX2P48431 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX2P48431 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 OR7E117P-201ENST00000422682 1112 ntBASIC6.13□□□□□ -1.43
SOX2P48431 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX2P48431 AL445528.1-201ENST00000426330 420 ntBASIC6.13□□□□□ -1.43
SOX2P48431 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX2P48431 UBE2V1P6-201ENST00000430840 422 ntBASIC6.13□□□□□ -1.43
SOX2P48431 MTND4LP7-201ENST00000431728 294 ntBASIC6.13□□□□□ -1.43
SOX2P48431 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX2P48431 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SOX2P48431 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 AC015908.1-201ENST00000478739 476 ntBASIC6.13□□□□□ -1.43
SOX2P48431 RPL23AP8-201ENST00000479812 475 ntBASIC6.13□□□□□ -1.43
SOX2P48431 AC096743.1-201ENST00000485172 319 ntBASIC6.13□□□□□ -1.43
SOX2P48431 RN7SL239P-201ENST00000490061 300 ntBASIC6.13□□□□□ -1.43
SOX2P48431 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX2P48431 RN7SL104P-201ENST00000498686 293 ntBASIC6.13□□□□□ -1.43
SOX2P48431 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX2P48431 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX2P48431 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.13□□□□□ -1.43
SOX2P48431 IGLVI-70-201ENST00000523272 390 ntBASIC6.13□□□□□ -1.43
SOX2P48431 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX2P48431 OR10D4P-201ENST00000525892 951 ntBASIC6.13□□□□□ -1.43
SOX2P48431 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX2P48431 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX2P48431 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX2P48431 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.13□□□□□ -1.43
SOX2P48431 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.13□□□□□ -1.43
SOX2P48431 OR7E94P-202ENST00000601375 790 ntBASIC6.13□□□□□ -1.43
SOX2P48431 CYCSP1-201ENST00000604815 315 ntBASIC6.13□□□□□ -1.43
SOX2P48431 PPATP2-201ENST00000605635 508 ntBASIC6.13□□□□□ -1.43
SOX2P48431 AC242628.1-201ENST00000606810 391 ntBASIC6.13□□□□□ -1.43
SOX2P48431 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX2P48431 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.13□□□□□ -1.43
SOX2P48431 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 CASC19-243ENST00000641588 1546 ntBASIC6.13□□□□□ -1.43
SOX2P48431 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 AC005034.3-201ENST00000604845 1747 ntBASIC6.13□□□□□ -1.43
SOX2P48431 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 AC105114.1-201ENST00000624795 1862 ntBASIC6.13□□□□□ -1.43
SOX2P48431 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SOX2P48431 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.13□□□□□ -1.43
SOX2P48431 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX2P48431 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX2P48431 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX2P48431 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 RNU1-38P-201ENST00000362817 144 ntBASIC6.12□□□□□ -1.43
SOX2P48431 RNU6-670P-201ENST00000364312 104 ntBASIC6.12□□□□□ -1.43
SOX2P48431 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX2P48431 SNORD15A-201ENST00000384214 148 ntBASIC6.12□□□□□ -1.43
SOX2P48431 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX2P48431 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SOX2P48431 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 AL358178.1-201ENST00000407698 397 ntBASIC6.12□□□□□ -1.43
SOX2P48431 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms