Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 SLAMF6P1-201ENST00000451067 602 ntBASIC6.25□□□□□ -1.41
SHC1P29353 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 BZW1P1-201ENST00000454901 1240 ntBASIC6.25□□□□□ -1.41
SHC1P29353 AL133480.2-201ENST00000456723 487 ntBASIC6.25□□□□□ -1.41
SHC1P29353 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.25□□□□□ -1.41
SHC1P29353 AC008868.1-201ENST00000509786 737 ntBASIC6.25□□□□□ -1.41
SHC1P29353 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 RNU2-45P-201ENST00000516068 187 ntBASIC6.25□□□□□ -1.41
SHC1P29353 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.25□□□□□ -1.41
SHC1P29353 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 AC130366.1-201ENST00000526505 1192 ntBASIC6.25□□□□□ -1.41
SHC1P29353 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.25□□□□□ -1.41
SHC1P29353 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.25□□□□□ -1.41
SHC1P29353 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.25□□□□□ -1.41
SHC1P29353 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.25□□□□□ -1.41
SHC1P29353 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.25□□□□□ -1.41
SHC1P29353 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.25□□□□□ -1.41
SHC1P29353 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.25□□□□□ -1.41
SHC1P29353 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.25□□□□□ -1.41
SHC1P29353 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.25□□□□□ -1.41
SHC1P29353 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 AC126474.2-201ENST00000623268 1750 ntBASIC6.25□□□□□ -1.41
SHC1P29353 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SHC1P29353 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.25□□□□□ -1.41
SHC1P29353 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SHC1P29353 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHC1P29353 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.24□□□□□ -1.41
SHC1P29353 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 FO082842.1-201ENST00000423552 1370 ntBASIC6.24□□□□□ -1.41
SHC1P29353 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 TRIM53CP-201ENST00000531490 1354 ntBASIC6.24□□□□□ -1.41
SHC1P29353 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 RN7SKP47-201ENST00000365347 328 ntBASIC6.24□□□□□ -1.41
SHC1P29353 RNA5SP176-201ENST00000390956 110 ntBASIC6.24□□□□□ -1.41
SHC1P29353 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 SETP22-201ENST00000412243 957 ntBASIC6.24□□□□□ -1.41
SHC1P29353 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.24□□□□□ -1.41
SHC1P29353 AL356133.1-201ENST00000444762 372 ntBASIC6.24□□□□□ -1.41
SHC1P29353 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.24□□□□□ -1.41
SHC1P29353 AC083806.1-201ENST00000468934 316 ntBASIC6.24□□□□□ -1.41
SHC1P29353 RN7SL868P-201ENST00000485915 303 ntBASIC6.24□□□□□ -1.41
SHC1P29353 MTCO1P55-201ENST00000489829 745 ntBASIC6.24□□□□□ -1.41
SHC1P29353 EEF1B2P2-201ENST00000519625 676 ntBASIC6.24□□□□□ -1.41
SHC1P29353 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.24□□□□□ -1.41
SHC1P29353 RBMS2P1-201ENST00000525031 1226 ntBASIC6.24□□□□□ -1.41
SHC1P29353 OR7E154P-201ENST00000525174 932 ntBASIC6.24□□□□□ -1.41
SHC1P29353 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.24□□□□□ -1.41
SHC1P29353 NXPE2P1-201ENST00000543705 726 ntBASIC6.24□□□□□ -1.41
SHC1P29353 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.24□□□□□ -1.41
SHC1P29353 AC016144.1-201ENST00000548175 1087 ntBASIC6.24□□□□□ -1.41
SHC1P29353 AL132640.1-201ENST00000559594 619 ntBASIC6.24□□□□□ -1.41
SHC1P29353 PRELID3BP3-201ENST00000584963 545 ntBASIC6.24□□□□□ -1.41
SHC1P29353 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHC1P29353 AL035410.2-201ENST00000604963 864 ntBASIC6.24□□□□□ -1.41
SHC1P29353 Z93930.3-201ENST00000607919 749 ntBASIC6.24□□□□□ -1.41
SHC1P29353 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 AC079414.3-201ENST00000612986 1090 ntBASIC6.24□□□□□ -1.41
SHC1P29353 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.24□□□□□ -1.41
SHC1P29353 MIR665-201ENST00000635949 72 ntBASIC6.24□□□□□ -1.41
SHC1P29353 SAMMSON-214ENST00000641395 1264 ntBASIC6.24□□□□□ -1.41
SHC1P29353 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 AP005139.1-201ENST00000580702 1647 ntBASIC6.24□□□□□ -1.41
SHC1P29353 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.24□□□□□ -1.41
SHC1P29353 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHC1P29353 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.24□□□□□ -1.41
SHC1P29353 AL669831.5-218ENST00000591702 1873 ntBASIC6.24□□□□□ -1.41
SHC1P29353 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SHC1P29353 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms