Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU1-24P-201ENST00000364285 165 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 RPL12P49-201ENST00000441100 121 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 SNORA74.1-201ENST00000516320 180 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.14□□□□□ -1.43
FREM3P0C091 OR9L1P-201ENST00000529493 933 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AC079866.1-201ENST00000534985 1220 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 MIR3157-201ENST00000578688 85 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.14□□□□□ -1.43
FREM3P0C091 AC005753.1-201ENST00000623837 618 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AC130448.2-201ENST00000624082 374 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 UG0898H09-202ENST00000623646 7040 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 ASNSP6-201ENST00000592770 1618 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 RBPJP6-201ENST00000411556 1431 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.14□□□□□ -1.43
FREM3P0C091 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 RNU1-5P-201ENST00000362684 144 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 RN7SKP221-201ENST00000410420 301 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.14□□□□□ -1.43
FREM3P0C091 AC135721.2-201ENST00000464237 300 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 AL591767.3-201ENST00000554632 525 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 AC087575.1-201ENST00000585087 229 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.14□□□□□ -1.43
FREM3P0C091 AL591222.2-201ENST00000604443 754 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
FREM3P0C091 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
FREM3P0C091 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 AC067942.1-201ENST00000488045 1493 ntBASIC6.14□□□□□ -1.43
FREM3P0C091 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.14□□□□□ -1.43
FREM3P0C091 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FREM3P0C091 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.13□□□□□ -1.43
FREM3P0C091 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.13□□□□□ -1.43
FREM3P0C091 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.13□□□□□ -1.43
FREM3P0C091 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.13□□□□□ -1.43
FREM3P0C091 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 RN7SKP296-201ENST00000411185 341 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 UBTFL2-201ENST00000411859 1191 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 PTPN2P1-201ENST00000423212 1072 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 PSMC1P2-201ENST00000423961 1204 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 AL354714.5-201ENST00000450131 590 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 AC044810.1-201ENST00000480271 711 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 RN7SKP196-201ENST00000516267 345 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.13□□□□□ -1.43
FREM3P0C091 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 AC111186.1-201ENST00000604684 130 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 AC012676.3-201ENST00000614983 479 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 AC092821.2-201ENST00000545710 2042 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.13□□□□□ -1.43
FREM3P0C091 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
FREM3P0C091 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
FREM3P0C091 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 MROH3P-201ENST00000435735 2676 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
FREM3P0C091 AC105114.1-201ENST00000624795 1862 ntBASIC6.13□□□□□ -1.43
FREM3P0C091 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.13□□□□□ -1.43
FREM3P0C091 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms