Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OR5BK1P-201ENST00000550421 823 ntBASIC7.2□□□□□ -1.26
APOEP02649 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.2□□□□□ -1.26
APOEP02649 AL591222.2-201ENST00000604443 754 ntBASIC7.2□□□□□ -1.26
APOEP02649 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.2□□□□□ -1.26
APOEP02649 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
APOEP02649 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
APOEP02649 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
APOEP02649 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
APOEP02649 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
APOEP02649 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
APOEP02649 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 AL359195.2-201ENST00000623657 4412 ntBASIC7.19□□□□□ -1.26
APOEP02649 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 AC127070.3-201ENST00000503695 3263 ntBASIC7.19□□□□□ -1.26
APOEP02649 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
APOEP02649 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 RNU1-24P-201ENST00000364285 165 ntBASIC7.19□□□□□ -1.26
APOEP02649 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 AC017035.1-201ENST00000411999 1115 ntBASIC7.19□□□□□ -1.26
APOEP02649 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.19□□□□□ -1.26
APOEP02649 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.19□□□□□ -1.26
APOEP02649 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.19□□□□□ -1.26
APOEP02649 AC122714.1-201ENST00000502510 459 ntBASIC7.19□□□□□ -1.26
APOEP02649 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.19□□□□□ -1.26
APOEP02649 SCARNA11.1-201ENST00000516918 132 ntBASIC7.19□□□□□ -1.26
APOEP02649 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.19□□□□□ -1.26
APOEP02649 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.19□□□□□ -1.26
APOEP02649 PTCHD3P1-201ENST00000612350 537 ntBASIC7.19□□□□□ -1.26
APOEP02649 AC026951.2-201ENST00000613847 241 ntBASIC7.19□□□□□ -1.26
APOEP02649 AC007671.1-201ENST00000616957 830 ntBASIC7.19□□□□□ -1.26
APOEP02649 AC091059.2-201ENST00000623355 614 ntBASIC7.19□□□□□ -1.26
APOEP02649 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.19□□□□□ -1.26
APOEP02649 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
APOEP02649 AL512353.3-201ENST00000417517 1326 ntBASIC7.19□□□□□ -1.26
APOEP02649 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
APOEP02649 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.19□□□□□ -1.26
APOEP02649 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.19□□□□□ -1.26
APOEP02649 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.19□□□□□ -1.26
APOEP02649 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
APOEP02649 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.18□□□□□ -1.26
APOEP02649 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
APOEP02649 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.18□□□□□ -1.26
APOEP02649 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 AC083806.2-201ENST00000617795 2685 ntBASIC7.18□□□□□ -1.26
APOEP02649 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
APOEP02649 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.18□□□□□ -1.26
APOEP02649 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
APOEP02649 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 RN7SKP47-201ENST00000365347 328 ntBASIC7.18□□□□□ -1.26
APOEP02649 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
APOEP02649 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.18□□□□□ -1.26
APOEP02649 RPLP1P10-201ENST00000413972 339 ntBASIC7.18□□□□□ -1.26
APOEP02649 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.18□□□□□ -1.26
APOEP02649 DUTP4-201ENST00000424782 475 ntBASIC7.18□□□□□ -1.26
APOEP02649 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.18□□□□□ -1.26
APOEP02649 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.18□□□□□ -1.26
APOEP02649 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
APOEP02649 RN7SL379P-201ENST00000479912 293 ntBASIC7.18□□□□□ -1.26
APOEP02649 AC096743.1-201ENST00000485172 319 ntBASIC7.18□□□□□ -1.26
APOEP02649 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.18□□□□□ -1.26
APOEP02649 RNA5SP96-201ENST00000516041 107 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms