Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 RPSAP7-201ENST00000456871 885 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC002075.1-201ENST00000457396 676 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 RN7SL12P-201ENST00000473849 290 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 YTHDF2P1-201ENST00000604759 1271 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC025171.4-201ENST00000607250 1047 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC005383.1-201ENST00000622689 534 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AL049541.2-201ENST00000626377 555 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AL449283.1-201ENST00000602631 3403 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 ZNF969P-201ENST00000510345 2341 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC004656.1-201ENST00000568479 4951 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AL592429.1-201ENST00000403909 1473 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AL731532.1-201ENST00000623972 4236 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC092952.1-201ENST00000397646 1209 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 KRT18P52-201ENST00000404956 846 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 SLC25A5P7-201ENST00000406156 896 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 VN1R13P-201ENST00000406212 885 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AL355862.1-201ENST00000412705 353 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC020983.1-201ENST00000417063 543 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 GAPDHP69-201ENST00000425504 1008 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AL135929.1-201ENST00000449287 552 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC133965.1-201ENST00000452984 354 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 snoU13.29-201ENST00000459370 104 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 RN7SL414P-201ENST00000469545 294 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 RN7SL608P-201ENST00000492377 279 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC090058.1-201ENST00000498788 435 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 SCARNA20.3-201ENST00000516913 131 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC087280.1-201ENST00000530632 1003 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC025252.2-201ENST00000537470 502 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 FAM30C-201ENST00000561158 410 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC034105.2-201ENST00000561866 238 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC063923.2-201ENST00000562158 928 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 DNM1P31-201ENST00000564149 696 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 EEF1B2P1-201ENST00000567221 672 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC096708.2-201ENST00000577676 512 ntBASIC5.31□□□□□ -1.56
RBFOX3A6NFN3 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms