Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 DUTP4-201ENST00000424782 475 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 OSTCP2-201ENST00000437956 444 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AL353803.3-201ENST00000444641 335 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 OR51P1P-201ENST00000447547 942 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC135721.2-201ENST00000464237 300 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 RN7SKP248-201ENST00000516278 305 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 EEF1B2P2-201ENST00000519625 676 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC100854.1-201ENST00000520351 341 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AP001803.1-201ENST00000525668 147 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC024451.4-201ENST00000602578 752 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC012510.1-201ENST00000607946 759 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AL161931.1-201ENST00000612768 246 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC026951.2-201ENST00000613847 241 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 RN7SL126P-201ENST00000616400 299 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC034229.6-201ENST00000623704 224 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC022034.1-201ENST00000512867 2156 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AL031123.3-201ENST00000623345 1837 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 DDX43P1-201ENST00000510713 1763 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC090774.4-201ENST00000578888 1372 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 RNA5SP114-201ENST00000363780 113 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 NPM1P31-201ENST00000399021 764 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 OR2W4P-201ENST00000406496 926 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 RN7SKP30-201ENST00000411373 334 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 FTLP17-201ENST00000432567 525 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 OR52U1P-201ENST00000439752 923 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 PSMA6P2-201ENST00000457574 686 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 RPL17P2-201ENST00000491913 451 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AP003080.1-202ENST00000526526 915 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 HNRNPCP8-201ENST00000528764 888 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 FXNP1-201ENST00000555153 337 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC067852.5-201ENST00000589299 310 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AL352984.2-202ENST00000613699 155 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AP003789.1-201ENST00000617737 605 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AL161420.1-201ENST00000619393 264 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC021422.1-201ENST00000621212 473 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC026108.1-201ENST00000635444 547 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC011471.4-201ENST00000638271 216 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms