Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AL589993.1-201ENST00000407450 2524 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC006511.2-201ENST00000388966 660 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC008171.1-201ENST00000395058 200 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AL359715.1-201ENST00000404330 555 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AL451061.1-201ENST00000407887 862 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 GTF2IP5-201ENST00000414608 731 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 MYL6P3-201ENST00000436904 432 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 RPS10P14-201ENST00000440748 502 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AL354714.5-201ENST00000450131 590 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 OR7E7P-201ENST00000455678 1012 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AL079303.1-201ENST00000486611 463 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 IGLC4-201ENST00000517690 248 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 OR4A1P-201ENST00000532342 920 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC067805.1-201ENST00000559344 470 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 GAPDHP41-201ENST00000613707 975 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 MIR6774-201ENST00000614651 70 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC091059.2-201ENST00000623355 614 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC090772.4-201ENST00000623599 362 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 CASC19-232ENST00000641480 1244 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 AC009831.5-201ENST00000624000 3189 ntBASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP1Q96SZ6 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 BX322650.1-201ENST00000332359 2143 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC110716.2-201ENST00000563865 3945 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC061975.7-201ENST00000592016 2692 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC241584.2-201ENST00000637142 2090 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 EEF1GP6-201ENST00000402309 905 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 SUMO2P13-201ENST00000403109 272 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 OR52N3P-201ENST00000413417 934 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 RPL17P17-201ENST00000419491 557 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 GSTA6P-201ENST00000424144 582 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC106901.1-201ENST00000425086 698 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 CHCHD3P1-201ENST00000425516 676 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 AC092447.3-201ENST00000426027 686 ntBASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP1Q96SZ6 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms