Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 AL133243.4-201ENST00000623116 3109 ntBASIC4.57□□□□□ -1.68
SYCNQ0VAF6 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SYCNQ0VAF6 MAPK10-287ENST00000641217 3037 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AL359263.1-201ENST00000441188 2796 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RNU12-2P-201ENST00000364789 156 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 SNORA70.5-201ENST00000365519 135 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RNA5SP53-201ENST00000391299 120 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RN7SKP271-201ENST00000410528 320 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RN7SKP236-201ENST00000410635 284 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 LSM3P3-201ENST00000436601 306 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AL139135.2-201ENST00000445040 433 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 OR51P1P-201ENST00000447547 942 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 PCMTD1P3-201ENST00000451824 472 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 PSMA6P2-201ENST00000457574 686 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC096754.1-201ENST00000508904 818 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 OR10J9P-201ENST00000511932 987 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC111000.1-201ENST00000514545 713 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 SCARNA18.2-201ENST00000516882 84 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC100854.1-201ENST00000520351 341 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 IGLVV-66-201ENST00000523818 341 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AP001803.1-201ENST00000525668 147 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AL132640.2-202ENST00000559732 614 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RN7SL199P-201ENST00000578752 281 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RN7SL656P-201ENST00000579044 281 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 MIR1273F-201ENST00000580581 99 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 RN7SL404P-201ENST00000582421 281 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC005070.2-201ENST00000604391 260 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC004839.1-201ENST00000610269 501 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC026108.1-201ENST00000635444 547 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AP005139.1-201ENST00000580702 1647 ntBASIC4.56□□□□□ -1.68
SYCNQ0VAF6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYCNQ0VAF6 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms