Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GAPDHP69-201ENST00000425504 1008 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 RNF11P2-201ENST00000427702 440 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 VN1R35P-201ENST00000428102 693 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.56□□□□□ -1.36
NKX6-1P78426 HMGN1P5-201ENST00000448591 263 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 OR52E7P-201ENST00000452394 933 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 TDGF1P6-201ENST00000463873 448 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.56□□□□□ -1.36
NKX6-1P78426 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.56□□□□□ -1.36
NKX6-1P78426 SUMO2P17-201ENST00000504438 285 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 MTCO1P31-201ENST00000506355 492 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AC093770.1-201ENST00000511559 571 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.56□□□□□ -1.36
NKX6-1P78426 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.56□□□□□ -1.36
NKX6-1P78426 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.56□□□□□ -1.36
NKX6-1P78426 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.56□□□□□ -1.36
NKX6-1P78426 AC007136.1-201ENST00000589141 199 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AC005479.3-201ENST00000602790 431 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AC004852.1-201ENST00000605206 154 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AL096855.2-201ENST00000605785 369 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AC012213.4-201ENST00000606457 354 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AC004775.1-201ENST00000607389 753 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AC090912.3-201ENST00000609775 533 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 MIR1264-201ENST00000616374 69 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 AC005899.6-201ENST00000620729 297 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 MIR6813-201ENST00000621638 56 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 AC245505.2-201ENST00000553572 3055 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.56□□□□□ -1.36
NKX6-1P78426 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 FADS2P1-201ENST00000611807 1446 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NKX6-1P78426 AP003175.1-201ENST00000641383 6658 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 AC104581.5-201ENST00000624171 7141 ntBASIC6.56□□□□□ -1.36
NKX6-1P78426 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.56□□□□□ -1.36
NKX6-1P78426 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NKX6-1P78426 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
NKX6-1P78426 AL589993.1-201ENST00000407450 2524 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX6-1P78426 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX6-1P78426 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX6-1P78426 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX6-1P78426 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX6-1P78426 ABCA11P-202ENST00000504019 2110 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX6-1P78426 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 AC007938.1-201ENST00000562524 2902 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 OR4K17-201ENST00000315543 1032 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 OR56A4-201ENST00000330728 1209 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 OR10D1P-201ENST00000355343 936 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX6-1P78426 IL6-202ENST00000401630 765 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX6-1P78426 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.55□□□□□ -1.36
NKX6-1P78426 RPL5P28-201ENST00000418634 693 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.55□□□□□ -1.36
NKX6-1P78426 PPIAP23-201ENST00000420099 497 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX6-1P78426 SNX18P3-201ENST00000424993 835 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 AC009362.1-201ENST00000427253 406 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 AC027124.1-201ENST00000440852 466 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX6-1P78426 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX6-1P78426 MTND2P6-201ENST00000455337 1030 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 AC013787.1-201ENST00000460165 307 ntBASIC6.55□□□□□ -1.36
NKX6-1P78426 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.55□□□□□ -1.36
NKX6-1P78426 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX6-1P78426 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.55□□□□□ -1.36
NKX6-1P78426 AC118282.1-201ENST00000506408 765 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms