Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.36□□□□□ -1.23
RB1P06400 AC084121.1-201ENST00000533882 835 ntBASIC7.36□□□□□ -1.23
RB1P06400 RAB28P4-201ENST00000622233 665 ntBASIC7.36□□□□□ -1.23
RB1P06400 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 AL512329.1-201ENST00000404600 1592 ntBASIC7.36□□□□□ -1.23
RB1P06400 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.36□□□□□ -1.23
RB1P06400 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.36□□□□□ -1.23
RB1P06400 TMEM75-201ENST00000624314 2165 ntBASIC7.36□□□□□ -1.23
RB1P06400 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.36□□□□□ -1.23
RB1P06400 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RB1P06400 OR2AH1P-202ENST00000641232 2744 ntBASIC7.36□□□□□ -1.23
RB1P06400 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.35□□□□□ -1.23
RB1P06400 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
RB1P06400 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 AL512662.1-201ENST00000624850 2251 ntBASIC7.35□□□□□ -1.23
RB1P06400 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
RB1P06400 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 RNA5SP512-201ENST00000364550 120 ntBASIC7.35□□□□□ -1.23
RB1P06400 PRELID1P1-201ENST00000403549 660 ntBASIC7.35□□□□□ -1.23
RB1P06400 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.35□□□□□ -1.23
RB1P06400 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.35□□□□□ -1.23
RB1P06400 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 RN7SL216P-201ENST00000471607 298 ntBASIC7.35□□□□□ -1.23
RB1P06400 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.35□□□□□ -1.23
RB1P06400 AC090568.1-201ENST00000509499 856 ntBASIC7.35□□□□□ -1.23
RB1P06400 OR7E158P-201ENST00000524483 910 ntBASIC7.35□□□□□ -1.23
RB1P06400 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.35□□□□□ -1.23
RB1P06400 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.35□□□□□ -1.23
RB1P06400 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 AC063977.7-201ENST00000594454 337 ntBASIC7.35□□□□□ -1.23
RB1P06400 AL590032.1-201ENST00000604920 252 ntBASIC7.35□□□□□ -1.23
RB1P06400 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 AC004241.2-201ENST00000614562 444 ntBASIC7.35□□□□□ -1.23
RB1P06400 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.35□□□□□ -1.23
RB1P06400 AC061999.1-201ENST00000624454 177 ntBASIC7.35□□□□□ -1.23
RB1P06400 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RB1P06400 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 MTCO1P46-201ENST00000451639 1491 ntBASIC7.35□□□□□ -1.23
RB1P06400 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RB1P06400 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.35□□□□□ -1.23
RB1P06400 TMCC1P1-201ENST00000518897 1980 ntBASIC7.35□□□□□ -1.23
RB1P06400 AP002800.1-201ENST00000624982 2225 ntBASIC7.35□□□□□ -1.23
RB1P06400 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
RB1P06400 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
RB1P06400 NBPF8-201ENST00000583271 5330 ntBASIC7.34□□□□□ -1.23
RB1P06400 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.34□□□□□ -1.23
RB1P06400 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.34□□□□□ -1.23
RB1P06400 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 QRSL1P1-201ENST00000400977 1540 ntBASIC7.34□□□□□ -1.23
RB1P06400 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.34□□□□□ -1.23
RB1P06400 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 RNA5SP474-201ENST00000391234 90 ntBASIC7.34□□□□□ -1.23
RB1P06400 AL590635.1-201ENST00000406314 586 ntBASIC7.34□□□□□ -1.23
RB1P06400 SMC4P1-201ENST00000414479 527 ntBASIC7.34□□□□□ -1.23
RB1P06400 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.34□□□□□ -1.23
RB1P06400 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.34□□□□□ -1.23
RB1P06400 AL121916.1-201ENST00000429405 308 ntBASIC7.34□□□□□ -1.23
RB1P06400 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.34□□□□□ -1.23
RB1P06400 AC131233.1-201ENST00000479200 955 ntBASIC7.34□□□□□ -1.23
RB1P06400 AC117500.1-201ENST00000497352 755 ntBASIC7.34□□□□□ -1.23
RB1P06400 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RB1P06400 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.34□□□□□ -1.23
RB1P06400 AC006512.2-201ENST00000543250 486 ntBASIC7.34□□□□□ -1.23
RB1P06400 NXPE2P1-201ENST00000543705 726 ntBASIC7.34□□□□□ -1.23
RB1P06400 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.34□□□□□ -1.23
RB1P06400 AL845552.1-201ENST00000556820 323 ntBASIC7.34□□□□□ -1.23
RB1P06400 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.34□□□□□ -1.23
RB1P06400 MIR3135A-201ENST00000578460 77 ntBASIC7.34□□□□□ -1.23
RB1P06400 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.34□□□□□ -1.23
RB1P06400 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms