Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MARK2P10-201ENST00000454959 1437 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 EEF1A1P2-201ENST00000553854 1447 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC079753.1-201ENST00000623243 3868 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 RNA5SP263-201ENST00000363376 128 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 RNU11-201ENST00000387069 134 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 RFKP1-201ENST00000400940 428 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 TRGV5P-201ENST00000419915 354 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC009963.4-201ENST00000448535 339 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 DBIL5P-202ENST00000453414 250 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 SNX18P8-201ENST00000455120 874 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 SNORA81.1-201ENST00000458922 177 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AP003115.1-201ENST00000569849 463 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 APOC2-204ENST00000591597 447 ntTSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC093063.1-201ENST00000599317 363 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AL360012.1-201ENST00000602813 131 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC245028.3-201ENST00000618197 285 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC025287.2-201ENST00000621911 668 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC090373.1-201ENST00000623955 603 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC007224.2-201ENST00000625011 510 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AL139254.2-202ENST00000641937 1156 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 SAMMSON-203ENST00000641005 2168 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 AP000432.2-201ENST00000624164 2048 ntBASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RBFOX3A6NFN3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 LINC01616-201ENST00000561816 2280 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 KYNUP1-201ENST00000466683 1406 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC020658.2-201ENST00000559030 4020 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC110373.1-201ENST00000505994 3505 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 RNA5SP79-201ENST00000365193 109 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 RNU6-316P-201ENST00000391027 107 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC121334.1-201ENST00000396414 802 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 RN7SKP254-201ENST00000410685 310 ntBASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.32□□□□□ -1.56
RBFOX3A6NFN3 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms