Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 AL354702.2-202ENST00000641481 890 ntBASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 VN2R1P-201ENST00000449668 1743 ntBASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 TUBBP10-201ENST00000427668 1301 ntBASIC5.22□□□□□ -1.57
HLA-DRB4X5D2U9 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DRB4X5D2U9 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC5.21□□□□□ -1.57
HLA-DRB4X5D2U9 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.21□□□□□ -1.57
HLA-DRB4X5D2U9 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DRB4X5D2U9 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DRB4X5D2U9 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DRB4X5D2U9 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.21□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DRB4X5D2U9 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 RNU12-2P-201ENST00000364789 156 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 MIR301B-201ENST00000390813 78 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC134879.1-201ENST00000426062 394 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AL451063.1-201ENST00000450164 1133 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC114755.1-201ENST00000453101 868 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 RPSAP48-201ENST00000466509 889 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 OR10J9P-201ENST00000511932 987 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 SCARNA18.2-201ENST00000516882 84 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC026458.1-201ENST00000564330 438 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 ACTG1P15-201ENST00000570019 1063 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC092960.1-201ENST00000604762 351 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 MIR6731-201ENST00000614863 72 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC087894.3-201ENST00000623682 349 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AL356585.10-201ENST00000641883 123 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 AC062029.1-202ENST00000606164 3651 ntBASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HLA-DRB4X5D2U9 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 AC073365.1-203ENST00000641055 1992 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 RPL12P13-201ENST00000310055 497 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 SNORA70.9-201ENST00000384370 135 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 RNA5SP53-201ENST00000391299 120 ntBASIC5.2□□□□□ -1.58
HLA-DRB4X5D2U9 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms