Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC016590.3-201ENST00000611171 753 ntBASIC6.17□□□□□ -1.42
SOX2P48431 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.17□□□□□ -1.42
SOX2P48431 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 CDY10P-201ENST00000452415 1567 ntBASIC6.17□□□□□ -1.42
SOX2P48431 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX2P48431 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX2P48431 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 THAP12P8-201ENST00000447914 2115 ntBASIC6.16□□□□□ -1.42
SOX2P48431 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX2P48431 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 AL136298.2-201ENST00000556497 1570 ntBASIC6.16□□□□□ -1.42
SOX2P48431 AC007406.5-201ENST00000570140 3170 ntBASIC6.16□□□□□ -1.42
SOX2P48431 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SOX2P48431 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SOX2P48431 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 SNORA55-201ENST00000364587 135 ntBASIC6.16□□□□□ -1.42
SOX2P48431 RNA5SP172-201ENST00000365061 118 ntBASIC6.16□□□□□ -1.42
SOX2P48431 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 RN7SKP89-201ENST00000410774 242 ntBASIC6.16□□□□□ -1.42
SOX2P48431 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 AL512504.1-201ENST00000415494 778 ntBASIC6.16□□□□□ -1.42
SOX2P48431 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX2P48431 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SOX2P48431 PHB2P1-201ENST00000434943 890 ntBASIC6.16□□□□□ -1.42
SOX2P48431 AL691517.1-201ENST00000440833 1235 ntBASIC6.16□□□□□ -1.42
SOX2P48431 AC079781.1-201ENST00000441505 394 ntBASIC6.16□□□□□ -1.42
SOX2P48431 AC011742.2-201ENST00000443818 352 ntBASIC6.16□□□□□ -1.42
SOX2P48431 SDHCP3-201ENST00000445371 506 ntBASIC6.16□□□□□ -1.42
SOX2P48431 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.16□□□□□ -1.42
SOX2P48431 RN7SL791P-201ENST00000467868 295 ntBASIC6.16□□□□□ -1.42
SOX2P48431 RN7SL621P-201ENST00000472565 299 ntBASIC6.16□□□□□ -1.42
SOX2P48431 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 AC127024.1-201ENST00000490847 418 ntBASIC6.16□□□□□ -1.42
SOX2P48431 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.16□□□□□ -1.42
SOX2P48431 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.16□□□□□ -1.42
SOX2P48431 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 AC104997.1-201ENST00000519761 717 ntBASIC6.16□□□□□ -1.42
SOX2P48431 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC6.16□□□□□ -1.42
SOX2P48431 CIPC-206ENST00000555611 599 ntTSL 4 BASIC6.16□□□□□ -1.42
SOX2P48431 RN7SL786P-201ENST00000579130 298 ntBASIC6.16□□□□□ -1.42
SOX2P48431 AC015818.6-201ENST00000584274 634 ntBASIC6.16□□□□□ -1.42
SOX2P48431 RPSAP66-201ENST00000592196 606 ntBASIC6.16□□□□□ -1.42
SOX2P48431 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.16□□□□□ -1.42
SOX2P48431 BNIP3P19-201ENST00000605397 577 ntBASIC6.16□□□□□ -1.42
SOX2P48431 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 AC106795.5-201ENST00000623288 454 ntBASIC6.16□□□□□ -1.42
SOX2P48431 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX2P48431 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 AL606490.2-201ENST00000457562 1330 ntBASIC6.16□□□□□ -1.42
SOX2P48431 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SOX2P48431 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX2P48431 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX2P48431 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX2P48431 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SOX2P48431 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX2P48431 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SOX2P48431 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX2P48431 AC008957.3-201ENST00000624112 2242 ntBASIC6.15□□□□□ -1.42
SOX2P48431 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms