Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.78□□□□□ -1.48
CDX1P47902 RNU1-38P-201ENST00000362817 144 ntBASIC5.78□□□□□ -1.48
CDX1P47902 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 MIR199B-201ENST00000384849 110 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AL589994.1-201ENST00000404962 340 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.78□□□□□ -1.48
CDX1P47902 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC5.78□□□□□ -1.48
CDX1P47902 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC5.78□□□□□ -1.48
CDX1P47902 FTOP1-201ENST00000419363 861 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.78□□□□□ -1.48
CDX1P47902 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 VDAC2P3-201ENST00000430995 828 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC5.78□□□□□ -1.48
CDX1P47902 AL353803.3-201ENST00000444641 335 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC5.78□□□□□ -1.48
CDX1P47902 AC092570.2-201ENST00000452117 1143 ntBASIC5.78□□□□□ -1.48
CDX1P47902 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC5.78□□□□□ -1.48
CDX1P47902 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.78□□□□□ -1.48
CDX1P47902 NDUFB4P1-201ENST00000462398 381 ntBASIC5.78□□□□□ -1.48
CDX1P47902 RN7SL791P-201ENST00000467868 295 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC008620.1-201ENST00000468453 592 ntBASIC5.78□□□□□ -1.48
CDX1P47902 RPL5P15-201ENST00000475870 897 ntBASIC5.78□□□□□ -1.48
CDX1P47902 DEFB109A-201ENST00000482450 265 ntBASIC5.78□□□□□ -1.48
CDX1P47902 MORF4L2P1-201ENST00000503761 858 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC106760.2-201ENST00000504159 619 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC134698.1-201ENST00000511619 643 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.78□□□□□ -1.48
CDX1P47902 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC5.78□□□□□ -1.48
CDX1P47902 OR5D2P-201ENST00000524390 911 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC103855.4-201ENST00000533158 265 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC068631.3-201ENST00000538831 225 ntBASIC5.78□□□□□ -1.48
CDX1P47902 MTND2P17-201ENST00000550281 688 ntBASIC5.78□□□□□ -1.48
CDX1P47902 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.78□□□□□ -1.48
CDX1P47902 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC5.78□□□□□ -1.48
CDX1P47902 EIF4EBP2P2-201ENST00000563883 333 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AP006587.6-201ENST00000582128 1091 ntBASIC5.78□□□□□ -1.48
CDX1P47902 RN7SL657P-201ENST00000582431 293 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AP000919.1-201ENST00000582850 985 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC067852.5-201ENST00000589299 310 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 AC097376.1-201ENST00000602907 997 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AL035417.2-201ENST00000603887 796 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AP005329.3-201ENST00000609924 686 ntBASIC5.78□□□□□ -1.48
CDX1P47902 FRG2MP-201ENST00000613317 856 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.78□□□□□ -1.48
CDX1P47902 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 AC183089.2-201ENST00000637931 916 ntBASIC5.78□□□□□ -1.48
CDX1P47902 AC009779.8-201ENST00000641684 4384 ntBASIC5.78□□□□□ -1.48
CDX1P47902 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 MAPK10-357ENST00000641831 2858 ntBASIC5.78□□□□□ -1.48
CDX1P47902 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC5.78□□□□□ -1.48
CDX1P47902 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.78□□□□□ -1.48
CDX1P47902 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 AC007342.9-201ENST00000623877 1385 ntBASIC5.78□□□□□ -1.48
CDX1P47902 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.78□□□□□ -1.48
CDX1P47902 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDX1P47902 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
CDX1P47902 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.77□□□□□ -1.49
CDX1P47902 AC090132.1-201ENST00000524071 1480 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AP000432.2-201ENST00000624164 2048 ntBASIC5.77□□□□□ -1.49
CDX1P47902 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.77□□□□□ -1.49
CDX1P47902 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.77□□□□□ -1.49
CDX1P47902 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 OR7E25P-201ENST00000344844 931 ntBASIC5.77□□□□□ -1.49
CDX1P47902 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 RN7SKP36-201ENST00000363997 312 ntBASIC5.77□□□□□ -1.49
CDX1P47902 RNA5SP238-201ENST00000365464 120 ntBASIC5.77□□□□□ -1.49
CDX1P47902 ARMCX7P-201ENST00000372828 562 ntBASIC5.77□□□□□ -1.49
CDX1P47902 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CDX1P47902 SNORA70.9-201ENST00000384370 135 ntBASIC5.77□□□□□ -1.49
CDX1P47902 SNORA68-201ENST00000384437 133 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AC240504.1-201ENST00000395709 845 ntBASIC5.77□□□□□ -1.49
CDX1P47902 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.77□□□□□ -1.49
CDX1P47902 EEF1GP7-201ENST00000422983 703 ntBASIC5.77□□□□□ -1.49
CDX1P47902 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 Z83313.1-201ENST00000433780 718 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AC105052.2-201ENST00000434317 794 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC5.77□□□□□ -1.49
CDX1P47902 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.77□□□□□ -1.49
CDX1P47902 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 AC009153.1-201ENST00000485799 496 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AC008040.4-201ENST00000494834 768 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AC108120.1-201ENST00000506543 991 ntBASIC5.77□□□□□ -1.49
CDX1P47902 CCNHP1-201ENST00000513311 678 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms