Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.24□□□□□ -1.25
APOEP02649 MIR6883-201ENST00000614952 78 ntBASIC7.24□□□□□ -1.25
APOEP02649 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.24□□□□□ -1.25
APOEP02649 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.24□□□□□ -1.25
APOEP02649 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.24□□□□□ -1.25
APOEP02649 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.23□□□□□ -1.25
APOEP02649 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.23□□□□□ -1.25
APOEP02649 ZNF658B-201ENST00000602828 3408 ntBASIC7.23□□□□□ -1.25
APOEP02649 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
APOEP02649 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 AC129502.1-201ENST00000623261 1654 ntBASIC7.23□□□□□ -1.25
APOEP02649 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.23□□□□□ -1.25
APOEP02649 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 SETP22-201ENST00000412243 957 ntBASIC7.23□□□□□ -1.25
APOEP02649 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.23□□□□□ -1.25
APOEP02649 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 AC091390.2-201ENST00000432573 374 ntBASIC7.23□□□□□ -1.25
APOEP02649 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.23□□□□□ -1.25
APOEP02649 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 AL354872.1-201ENST00000456361 967 ntBASIC7.23□□□□□ -1.25
APOEP02649 PSMA6P2-201ENST00000457574 686 ntBASIC7.23□□□□□ -1.25
APOEP02649 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.23□□□□□ -1.25
APOEP02649 AC096661.1-201ENST00000515870 822 ntBASIC7.23□□□□□ -1.25
APOEP02649 RNU2-45P-201ENST00000516068 187 ntBASIC7.23□□□□□ -1.25
APOEP02649 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.23□□□□□ -1.25
APOEP02649 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC7.23□□□□□ -1.25
APOEP02649 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC7.23□□□□□ -1.25
APOEP02649 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.23□□□□□ -1.25
APOEP02649 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.23□□□□□ -1.25
APOEP02649 SIGLEC31P-201ENST00000594237 551 ntBASIC7.23□□□□□ -1.25
APOEP02649 RPS27AP19-201ENST00000597285 458 ntBASIC7.23□□□□□ -1.25
APOEP02649 AC007255.2-201ENST00000604053 631 ntBASIC7.23□□□□□ -1.25
APOEP02649 AC020765.1-201ENST00000604296 328 ntBASIC7.23□□□□□ -1.25
APOEP02649 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.23□□□□□ -1.25
APOEP02649 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC7.23□□□□□ -1.25
APOEP02649 AC034229.6-201ENST00000623704 224 ntBASIC7.23□□□□□ -1.25
APOEP02649 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
APOEP02649 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.23□□□□□ -1.25
APOEP02649 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
APOEP02649 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 AC010401.2-201ENST00000575137 4934 ntBASIC7.23□□□□□ -1.25
APOEP02649 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.23□□□□□ -1.25
APOEP02649 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
APOEP02649 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
APOEP02649 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
APOEP02649 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
APOEP02649 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.22□□□□□ -1.25
APOEP02649 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.22□□□□□ -1.25
APOEP02649 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.22□□□□□ -1.25
APOEP02649 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 AC104837.1-201ENST00000444644 1587 ntBASIC7.22□□□□□ -1.25
APOEP02649 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.22□□□□□ -1.25
APOEP02649 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
APOEP02649 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
APOEP02649 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.22□□□□□ -1.25
APOEP02649 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
APOEP02649 CHCHD4P5-201ENST00000436684 427 ntBASIC7.22□□□□□ -1.25
APOEP02649 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.22□□□□□ -1.25
APOEP02649 AC009244.1-201ENST00000450566 258 ntBASIC7.22□□□□□ -1.25
APOEP02649 AL096803.1-201ENST00000456921 1021 ntBASIC7.22□□□□□ -1.25
APOEP02649 RPL5P12-201ENST00000477071 851 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms