Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC9.93□□□□□ -0.82
HFM1A2PYH4 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
HFM1A2PYH4 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HFM1A2PYH4 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HFM1A2PYH4 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
HFM1A2PYH4 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC096537.2-201ENST00000413707 714 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 AL929472.1-201ENST00000417484 429 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 AL139184.1-202ENST00000422303 222 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 DUTP4-201ENST00000424782 475 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC092601.1-201ENST00000444526 383 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 SULT1D1P-201ENST00000458020 882 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 RPL23AP68-201ENST00000480924 445 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC092375.1-201ENST00000550410 637 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC007993.1-201ENST00000621298 2430 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 CLCA3P-203ENST00000490028 2781 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 AC083806.2-201ENST00000617795 2685 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 COL6A4P1-202ENST00000487147 4317 ntBASIC9.92□□□□□ -0.82
HFM1A2PYH4 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC9.92□□□□□ -0.82
HFM1A2PYH4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HFM1A2PYH4 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 PLA2G12AP2-201ENST00000424744 264 ntBASIC9.91□□□□□ -0.82
HFM1A2PYH4 H3F3AP3-201ENST00000497682 407 ntBASIC9.91□□□□□ -0.82
HFM1A2PYH4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 OR52K3P-201ENST00000531655 943 ntBASIC9.91□□□□□ -0.82
HFM1A2PYH4 RPL41P2-201ENST00000544920 409 ntBASIC9.91□□□□□ -0.82
HFM1A2PYH4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 MIR212-201ENST00000586026 110 ntBASIC9.91□□□□□ -0.82
HFM1A2PYH4 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 AC010333.3-201ENST00000615100 402 ntBASIC9.91□□□□□ -0.82
HFM1A2PYH4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC9.91□□□□□ -0.82
HFM1A2PYH4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 MALAT1-202ENST00000534336 8708 ntBASIC9.91□□□□□ -0.82
HFM1A2PYH4 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HFM1A2PYH4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC9.91□□□□□ -0.82
HFM1A2PYH4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC9.9□□□□□ -0.82
HFM1A2PYH4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC9.9□□□□□ -0.82
HFM1A2PYH4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HFM1A2PYH4 RPL12P11-201ENST00000439970 501 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 NPM1P23-201ENST00000440193 849 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC245291.3-201ENST00000443400 292 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 LAPTM4BP1-201ENST00000447781 690 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
HFM1A2PYH4 RN7SL705P-201ENST00000481678 294 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 RN7SL170P-201ENST00000487098 295 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC018645.1-201ENST00000505003 109 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 IGHVII-60-1-201ENST00000519079 256 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC008429.2-201ENST00000523057 864 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC9.9□□□□□ -0.82
HFM1A2PYH4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC121758.1-202ENST00000556917 658 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC037479.1-201ENST00000558361 625 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC9.9□□□□□ -0.82
HFM1A2PYH4 AL356986.1-201ENST00000604085 341 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 AL499605.1-201ENST00000604628 403 ntBASIC9.9□□□□□ -0.82
HFM1A2PYH4 uc_338.29-201ENST00000615099 168 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms