Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 FAUP2-201ENST00000394301 401 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC226101.1-201ENST00000401483 387 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AL157698.1-201ENST00000415190 1011 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 ATP5LP4-201ENST00000434169 307 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 PSMA6P2-201ENST00000457574 686 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 WBP1LP1-201ENST00000460451 896 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AP003084.1-201ENST00000524828 742 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC090971.3-201ENST00000557871 1041 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AL031846.1-201ENST00000560933 314 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC096708.2-201ENST00000577676 512 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 RN7SL42P-201ENST00000579786 294 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 CDY10P-201ENST00000452415 1567 ntBASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDD3Q9Y3P4 CASC19-243ENST00000641588 1546 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AC110597.1-201ENST00000562669 3176 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 TATDN2P3-201ENST00000452855 3665 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 NPM1P38-201ENST00000403835 865 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 MIR1231-201ENST00000408101 92 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 CLIC4P3-201ENST00000422221 752 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 PHB2P1-201ENST00000434943 890 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 RPLP0P1-201ENST00000457002 361 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 SNORA35.1-201ENST00000458908 128 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 CEACAMP3-202ENST00000483806 638 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 NACAP6-201ENST00000509572 622 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AC097460.2-201ENST00000511857 741 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 VDAC2P2-201ENST00000544463 901 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AC087575.1-201ENST00000585087 229 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 AL049541.2-201ENST00000626377 555 ntBASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms