Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH9Q9HC56 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
PCDH9Q9HC56 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.09□□□□□ -1.28
PCDH9Q9HC56 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
PCDH9Q9HC56 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.28
PCDH9Q9HC56 CDY19P-201ENST00000411668 1613 ntBASIC7.09□□□□□ -1.28
PCDH9Q9HC56 CDY18P-201ENST00000438294 1609 ntBASIC7.09□□□□□ -1.28
PCDH9Q9HC56 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 OR52S1P-201ENST00000427016 937 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 BX005266.3-201ENST00000443013 1075 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 CRYGGP-201ENST00000443337 145 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 RN7SL149P-201ENST00000465197 281 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 RPS10P28-201ENST00000480396 498 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC134698.1-201ENST00000511619 643 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC073581.1-201ENST00000519036 575 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AP000662.1-201ENST00000530952 487 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC103855.4-201ENST00000533158 265 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC090241.1-201ENST00000587732 621 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AL121985.3-201ENST00000620690 523 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC012629.3-201ENST00000623397 328 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC243725.1-201ENST00000637164 436 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AL136531.3-201ENST00000624378 3658 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 TMEM75-201ENST00000624314 2165 ntBASIC7.08□□□□□ -1.28
PCDH9Q9HC56 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH9Q9HC56 BRD7P1-201ENST00000557705 1915 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC005034.3-201ENST00000604845 1747 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 CASC19-243ENST00000641588 1546 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 BRD7P6-201ENST00000431406 1860 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AP002800.1-201ENST00000624982 2225 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 SALL4P7-201ENST00000555779 3120 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 RNA5SP65-201ENST00000363166 119 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 RN7SKP148-201ENST00000410179 275 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 RNA5SP280-201ENST00000411230 115 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC024937.2-201ENST00000411669 1242 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC096537.2-201ENST00000413707 714 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AL161742.1-201ENST00000418154 584 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 GAPDHP69-201ENST00000425504 1008 ntBASIC7.07□□□□□ -1.28
PCDH9Q9HC56 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH9Q9HC56 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms