Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC009948.5-201ENST00000624360 4406 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL355615.1-201ENST00000406187 641 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MIR1231-201ENST00000408101 92 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 RAB9AP4-201ENST00000415230 609 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL360013.1-201ENST00000419031 858 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC099344.1-201ENST00000433548 492 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL590682.1-201ENST00000437248 344 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC108039.2-201ENST00000440214 359 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 ARL4AP3-201ENST00000441452 574 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL358794.1-201ENST00000445689 381 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC004022.1-201ENST00000447766 1066 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MTND2P19-201ENST00000449129 1012 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC016489.1-201ENST00000461109 375 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 RN7SL36P-201ENST00000469345 276 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 RN7SL335P-201ENST00000482790 304 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC093663.2-201ENST00000484625 313 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 EIF1P7-201ENST00000487533 337 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 RPS3AP22-201ENST00000488297 769 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC010476.1-201ENST00000519111 851 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 OR11J5P-201ENST00000556889 934 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MIR5705-201ENST00000579870 89 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC005244.1-201ENST00000582566 339 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 GLUD1P2-201ENST00000583339 201 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 GLUD1P8-201ENST00000585063 203 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC026741.1-201ENST00000605892 482 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC107952.2-201ENST00000606048 486 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC104073.3-201ENST00000610942 955 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC087072.2-201ENST00000621060 682 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 OR7A1P-202ENST00000641542 1158 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSBP3Q9BWW4 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
SSBP3Q9BWW4 GUCY2GP-201ENST00000479705 3222 ntBASIC6.4□□□□□ -1.38
SSBP3Q9BWW4 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 278.7 ms