Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC090771.1-201ENST00000585803 1618 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC092111.1-201ENST00000618256 3358 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 RNA5SP429-201ENST00000363688 109 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SKP107-201ENST00000364157 290 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR138-2-201ENST00000384916 84 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 FTLP17-201ENST00000432567 525 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AL158053.1-201ENST00000441503 453 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 SLAMF6P1-201ENST00000451067 602 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 RBMY2BP-202ENST00000451071 1156 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 GAPDHP53-201ENST00000458397 924 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SL88P-201ENST00000480166 299 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 RPL10P7-201ENST00000495649 625 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC055733.3-201ENST00000505214 523 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SKP233-201ENST00000517005 110 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 RBMS2P1-201ENST00000525031 1226 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC040174.2-201ENST00000602701 465 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AL451086.1-201ENST00000605596 223 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC104184.1-201ENST00000607513 721 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AL161420.1-201ENST00000619393 264 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC005355.2-201ENST00000625064 484 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AC140479.4-205ENST00000636339 820 ntBASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP1Q96SZ6 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC015871.4-201ENST00000624650 2260 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR620-201ENST00000385232 95 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SKP268-201ENST00000411107 316 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 PHB2P1-201ENST00000434943 890 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 Z80107.1-201ENST00000436830 412 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC009518.3-201ENST00000438972 253 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 RPS19P6-201ENST00000441327 433 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 BX005266.3-201ENST00000443013 1075 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC005517.1-201ENST00000452091 489 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AL354872.1-201ENST00000456361 967 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms