Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 MED28P7-201ENST00000456611 530 ntBASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 PABPC1P10-201ENST00000464731 381 ntBASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AL133372.1-201ENST00000493565 745 ntBASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 PFN2-213ENST00000494827 793 ntTSL 4 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 RN7SL667P-201ENST00000582817 298 ntBASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AL078624.2-201ENST00000605063 554 ntBASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AP002800.1-201ENST00000624982 2225 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 MARK2P4-201ENST00000503381 2380 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 FAM204BP-201ENST00000369171 701 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 NRIR-202ENST00000414795 506 ntTSL 3 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC244453.4-201ENST00000419150 388 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC008753.1-201ENST00000423096 284 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 BX323845.2-201ENST00000458382 234 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC025271.1-201ENST00000485045 429 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 RPL41P2-201ENST00000544920 409 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 MRPS21P9-201ENST00000571150 257 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 OR7E19P-202ENST00000589942 844 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC007671.1-201ENST00000616957 830 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 AC020978.6-201ENST00000571197 3177 ntBASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHMP4CQ96CF2 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 ABCA11P-202ENST00000504019 2110 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AC093844.1-201ENST00000514910 1361 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 SOD1P1-201ENST00000407803 440 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 ZBTB8OSP2-201ENST00000423890 504 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 HMGB1P32-201ENST00000425971 565 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AGKP1-201ENST00000455254 1263 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 RPS4XP23-201ENST00000487801 237 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 RPS10P20-201ENST00000494130 463 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 OR10J9P-201ENST00000511932 987 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AC024085.1-201ENST00000604299 432 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AC027271.1-201ENST00000610270 610 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 TP53TG1_2.1-201ENST00000611226 182 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 MIR6774-201ENST00000614651 70 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 RFC1-217ENST00000639695 867 ntTSL 5 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 MAPK10-365ENST00000641902 3825 ntBASIC8.41□□□□□ -1.06
CHMP4CQ96CF2 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms