Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RPL36AP33-201ENST00000450395 310 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AL603839.3-201ENST00000450713 605 ntTSL 3 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC009108.1-201ENST00000473913 796 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC112719.1-201ENST00000477971 315 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 RPL7AP8-201ENST00000481963 804 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 RN7SL236P-201ENST00000484759 284 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 PDCL3P4-201ENST00000489621 720 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 ARL2BPP4-201ENST00000506854 471 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 MTCYBP44-201ENST00000514835 823 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC021001.1-201ENST00000518703 987 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AP001207.1-201ENST00000524051 481 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AP000879.1-201ENST00000526174 976 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC118273.2-201ENST00000532092 465 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 EEF1B2P4-201ENST00000551398 348 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 ZNF519P2-201ENST00000557032 169 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC009432.1-201ENST00000560391 648 ntTSL 3 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC091304.4-201ENST00000565703 620 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 KIR3DP1-201ENST00000580853 628 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 RN7SL198P-201ENST00000583190 258 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AL353621.2-201ENST00000605340 133 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 SRGAP2D-201ENST00000605551 1021 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC068276.1-201ENST00000605793 379 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC091946.2-201ENST00000606105 291 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 MIR6083-201ENST00000612737 106 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC097641.3-201ENST00000613523 464 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC087742.2-201ENST00000616113 740 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 SEM1-223ENST00000623498 582 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AP003400.4-201ENST00000623832 399 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC116618.1-201ENST00000634617 774 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 MIR3160-2-201ENST00000637870 81 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC099063.3-201ENST00000642066 185 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 ZNF887P-201ENST00000431363 1407 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AL049840.1-201ENST00000498989 1404 ntTSL 4 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 MTND4P31-201ENST00000425607 1343 ntBASIC8.03□□□□□ -1.12
DEPDC4Q8N2C3 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
DEPDC4Q8N2C3 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
DEPDC4Q8N2C3 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 ABCA17P-204ENST00000494925 3478 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 RNU6-621P-201ENST00000364752 109 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC015983.1-201ENST00000441577 373 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC010099.2-201ENST00000443177 373 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 RN7SL541P-201ENST00000464317 283 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC104108.1-201ENST00000509930 412 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 HMGB3P13-201ENST00000511263 607 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AC008591.1-202ENST00000515569 462 ntTSL 2 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 RNU6-1308P-201ENST00000516817 103 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 IGHVII-15-1-201ENST00000517931 220 ntBASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.02□□□□□ -1.13
DEPDC4Q8N2C3 SLA-223ENST00000524345 1003 ntTSL 2 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms