Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC021220.1-201ENST00000507445 630 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 AC095057.1-201ENST00000507583 168 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.17□□□□□ -1.42
H3F3AP84243 RNA5SP278-201ENST00000517055 102 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
H3F3AP84243 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.17□□□□□ -1.42
H3F3AP84243 AC069240.2-201ENST00000550242 609 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 IGLJCOR18-201ENST00000584002 424 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 AC020914.7-201ENST00000594477 545 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 RPS27AP19-201ENST00000597285 458 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 AC012065.3-201ENST00000602736 439 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.17□□□□□ -1.42
H3F3AP84243 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.17□□□□□ -1.42
H3F3AP84243 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.17□□□□□ -1.42
H3F3AP84243 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.17□□□□□ -1.42
H3F3AP84243 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3F3AP84243 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.16□□□□□ -1.42
H3F3AP84243 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3F3AP84243 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3F3AP84243 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 OR10D1P-201ENST00000355343 936 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 MRPL32P1-201ENST00000406301 247 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 ZNF37CP-201ENST00000406795 241 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AL451061.1-201ENST00000407887 862 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 RNA5SP231-201ENST00000410496 138 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.16□□□□□ -1.42
H3F3AP84243 FABP5P1-201ENST00000423401 411 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC091390.2-201ENST00000432573 374 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 CDK7P1-201ENST00000434574 693 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 CHCHD4P5-201ENST00000436684 427 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 FABP5P2-201ENST00000439042 408 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 RPL7AP71-201ENST00000451120 739 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AL354872.1-201ENST00000456361 967 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AL133480.2-201ENST00000456723 487 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 RN7SL849P-201ENST00000485236 295 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 RN7SL868P-201ENST00000485915 303 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC023818.1-201ENST00000498379 384 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC021146.11-201ENST00000503319 491 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.16□□□□□ -1.42
H3F3AP84243 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.16□□□□□ -1.42
H3F3AP84243 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 RNA5SP116-201ENST00000516132 98 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 RBMS2P1-201ENST00000525031 1226 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC130366.1-201ENST00000526505 1192 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.16□□□□□ -1.42
H3F3AP84243 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.16□□□□□ -1.42
H3F3AP84243 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.16□□□□□ -1.42
H3F3AP84243 AL035410.2-201ENST00000604963 864 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 MIR8082-201ENST00000612488 81 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3F3AP84243 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.16□□□□□ -1.42
H3F3AP84243 TRIM53CP-201ENST00000531490 1354 ntBASIC6.16□□□□□ -1.42
H3F3AP84243 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
H3F3AP84243 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3AP84243 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms