Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CKS1BP61024 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CKS1BP61024 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 RNA5SP218-201ENST00000363188 109 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 AMELY-202ENST00000383036 621 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 MIR199B-201ENST00000384849 110 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 KRT18P52-201ENST00000404956 846 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 AC023141.10-201ENST00000415634 200 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 AL122003.1-201ENST00000435206 784 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 RPL10P6-201ENST00000457497 318 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 PGBD4P1-201ENST00000473644 407 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AL031073.1-201ENST00000503029 1139 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 GAPDHP31-201ENST00000509325 1014 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC146944.3-201ENST00000509969 371 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC100823.2-201ENST00000518337 699 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC4.86□□□□□ -1.63
CKS1BP61024 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC4.86□□□□□ -1.63
CKS1BP61024 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 EGLN3P1-201ENST00000541727 720 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 MYL6-211ENST00000548580 528 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 RN7SL376P-201ENST00000578594 264 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 LINC00674-202ENST00000590734 160 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 AC103724.4-201ENST00000605981 292 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 CUX2P1-201ENST00000606426 298 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AL731533.2-201ENST00000607898 578 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC103974.2-201ENST00000611319 778 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 MIR6872-201ENST00000612981 62 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 HCCAT5-202ENST00000642127 1029 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 EEF1A1P15-201ENST00000395772 1408 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 Z95114.1-201ENST00000624264 14574 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC4.86□□□□□ -1.63
CKS1BP61024 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.86□□□□□ -1.63
CKS1BP61024 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CKS1BP61024 AC090771.1-201ENST00000585803 1618 ntBASIC4.86□□□□□ -1.63
CKS1BP61024 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.86□□□□□ -1.63
CKS1BP61024 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CKS1BP61024 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC4.85□□□□□ -1.63
CKS1BP61024 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC4.85□□□□□ -1.63
CKS1BP61024 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.85□□□□□ -1.63
CKS1BP61024 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CKS1BP61024 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.85□□□□□ -1.63
CKS1BP61024 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CKS1BP61024 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CKS1BP61024 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC4.85□□□□□ -1.63
CKS1BP61024 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CKS1BP61024 AC022905.1-201ENST00000503430 3048 ntBASIC4.85□□□□□ -1.63
CKS1BP61024 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CKS1BP61024 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CKS1BP61024 DOCK11P1-201ENST00000553480 5932 ntBASIC4.85□□□□□ -1.63
CKS1BP61024 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.85□□□□□ -1.63
CKS1BP61024 RNA5SP71-201ENST00000362967 126 ntBASIC4.85□□□□□ -1.63
CKS1BP61024 AL109918.1-202ENST00000406724 436 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms