Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.43□□□□□ -1.22
SSR1P43307 AC143336.1-201ENST00000614164 836 ntBASIC7.43□□□□□ -1.22
SSR1P43307 AL353684.1-201ENST00000622677 1120 ntBASIC7.43□□□□□ -1.22
SSR1P43307 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SSR1P43307 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.43□□□□□ -1.22
SSR1P43307 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.43□□□□□ -1.22
SSR1P43307 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.42□□□□□ -1.22
SSR1P43307 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SSR1P43307 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SSR1P43307 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 AC005034.3-201ENST00000604845 1747 ntBASIC7.42□□□□□ -1.22
SSR1P43307 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.42□□□□□ -1.22
SSR1P43307 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 RN7SKP107-201ENST00000364157 290 ntBASIC7.42□□□□□ -1.22
SSR1P43307 SNORA30B-201ENST00000365319 129 ntBASIC7.42□□□□□ -1.22
SSR1P43307 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.42□□□□□ -1.22
SSR1P43307 VN1R66P-201ENST00000412929 916 ntBASIC7.42□□□□□ -1.22
SSR1P43307 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.42□□□□□ -1.22
SSR1P43307 AF274573.1-201ENST00000430535 494 ntBASIC7.42□□□□□ -1.22
SSR1P43307 GAPDHP75-201ENST00000433910 943 ntBASIC7.42□□□□□ -1.22
SSR1P43307 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7.42□□□□□ -1.22
SSR1P43307 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 RN7SL91P-201ENST00000469313 291 ntBASIC7.42□□□□□ -1.22
SSR1P43307 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.42□□□□□ -1.22
SSR1P43307 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.42□□□□□ -1.22
SSR1P43307 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.42□□□□□ -1.22
SSR1P43307 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.42□□□□□ -1.22
SSR1P43307 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.42□□□□□ -1.22
SSR1P43307 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.42□□□□□ -1.22
SSR1P43307 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.42□□□□□ -1.22
SSR1P43307 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.42□□□□□ -1.22
SSR1P43307 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.42□□□□□ -1.22
SSR1P43307 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
SSR1P43307 AL136139.1-201ENST00000605568 222 ntBASIC7.42□□□□□ -1.22
SSR1P43307 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.42□□□□□ -1.22
SSR1P43307 AC093909.6-201ENST00000624757 775 ntBASIC7.42□□□□□ -1.22
SSR1P43307 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.42□□□□□ -1.22
SSR1P43307 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.42□□□□□ -1.22
SSR1P43307 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.42□□□□□ -1.22
SSR1P43307 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.42□□□□□ -1.22
SSR1P43307 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.42□□□□□ -1.22
SSR1P43307 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SSR1P43307 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SSR1P43307 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.41□□□□□ -1.22
SSR1P43307 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
SSR1P43307 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.41□□□□□ -1.22
SSR1P43307 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.41□□□□□ -1.22
SSR1P43307 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 PABPC1P8-201ENST00000452851 2086 ntBASIC7.41□□□□□ -1.22
SSR1P43307 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SSR1P43307 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.41□□□□□ -1.22
SSR1P43307 U3.48-201ENST00000363172 216 ntBASIC7.41□□□□□ -1.22
SSR1P43307 RNA5SP172-201ENST00000365061 118 ntBASIC7.41□□□□□ -1.22
SSR1P43307 RN7SKP254-201ENST00000410685 310 ntBASIC7.41□□□□□ -1.22
SSR1P43307 DUTP4-201ENST00000424782 475 ntBASIC7.41□□□□□ -1.22
SSR1P43307 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 RPS21P1-201ENST00000434479 247 ntBASIC7.41□□□□□ -1.22
SSR1P43307 SUMO2P8-201ENST00000434672 286 ntBASIC7.41□□□□□ -1.22
SSR1P43307 ST13P2-201ENST00000438916 1109 ntBASIC7.41□□□□□ -1.22
SSR1P43307 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 PABPC1P10-201ENST00000464731 381 ntBASIC7.41□□□□□ -1.22
SSR1P43307 AC012123.2-201ENST00000485809 248 ntBASIC7.41□□□□□ -1.22
SSR1P43307 AP005202.1-201ENST00000489915 867 ntBASIC7.41□□□□□ -1.22
SSR1P43307 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 AC095057.1-201ENST00000507583 168 ntBASIC7.41□□□□□ -1.22
SSR1P43307 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.41□□□□□ -1.22
SSR1P43307 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SSR1P43307 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.41□□□□□ -1.22
SSR1P43307 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.41□□□□□ -1.22
SSR1P43307 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.41□□□□□ -1.22
SSR1P43307 AC241377.1-201ENST00000619797 406 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms