Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.88□□□□□ -1.31
CDH3P22223 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.88□□□□□ -1.31
CDH3P22223 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.88□□□□□ -1.31
CDH3P22223 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.88□□□□□ -1.31
CDH3P22223 PTCHD3P1-201ENST00000612350 537 ntBASIC6.88□□□□□ -1.31
CDH3P22223 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.88□□□□□ -1.31
CDH3P22223 MIR6774-201ENST00000614651 70 ntBASIC6.88□□□□□ -1.31
CDH3P22223 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CDH3P22223 MIR665-201ENST00000635949 72 ntBASIC6.88□□□□□ -1.31
CDH3P22223 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.88□□□□□ -1.31
CDH3P22223 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDH3P22223 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDH3P22223 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDH3P22223 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDH3P22223 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDH3P22223 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.88□□□□□ -1.31
CDH3P22223 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CDH3P22223 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDH3P22223 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
CDH3P22223 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 KARSP2-201ENST00000415696 1639 ntBASIC6.87□□□□□ -1.31
CDH3P22223 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.87□□□□□ -1.31
CDH3P22223 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CDH3P22223 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 SETP22-201ENST00000412243 957 ntBASIC6.87□□□□□ -1.31
CDH3P22223 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.87□□□□□ -1.31
CDH3P22223 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 UQCRHP1-204ENST00000424609 274 ntBASIC6.87□□□□□ -1.31
CDH3P22223 FTLP17-201ENST00000432567 525 ntBASIC6.87□□□□□ -1.31
CDH3P22223 AC114755.4-201ENST00000439114 443 ntBASIC6.87□□□□□ -1.31
CDH3P22223 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.87□□□□□ -1.31
CDH3P22223 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 MTCO1P55-201ENST00000489829 745 ntBASIC6.87□□□□□ -1.31
CDH3P22223 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.87□□□□□ -1.31
CDH3P22223 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.87□□□□□ -1.31
CDH3P22223 AC093325.1-201ENST00000508378 326 ntBASIC6.87□□□□□ -1.31
CDH3P22223 RNA5SP96-201ENST00000516041 107 ntBASIC6.87□□□□□ -1.31
CDH3P22223 MIR4800-201ENST00000537353 80 ntBASIC6.87□□□□□ -1.31
CDH3P22223 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.87□□□□□ -1.31
CDH3P22223 MIR744-201ENST00000578242 98 ntBASIC6.87□□□□□ -1.31
CDH3P22223 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.87□□□□□ -1.31
CDH3P22223 AC023513.1-201ENST00000604396 691 ntBASIC6.87□□□□□ -1.31
CDH3P22223 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CDH3P22223 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.87□□□□□ -1.31
CDH3P22223 AC012629.3-201ENST00000623397 328 ntBASIC6.87□□□□□ -1.31
CDH3P22223 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 AC139426.3-201ENST00000605648 2059 ntBASIC6.87□□□□□ -1.31
CDH3P22223 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.87□□□□□ -1.31
CDH3P22223 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDH3P22223 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
CDH3P22223 AL049634.1-201ENST00000453770 1720 ntBASIC6.87□□□□□ -1.31
CDH3P22223 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.87□□□□□ -1.31
CDH3P22223 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CDH3P22223 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.87□□□□□ -1.31
CDH3P22223 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
CDH3P22223 AL356361.1-201ENST00000400943 1459 ntBASIC6.86□□□□□ -1.31
CDH3P22223 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 AC061975.5-201ENST00000584928 1441 ntBASIC6.86□□□□□ -1.31
CDH3P22223 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.86□□□□□ -1.31
CDH3P22223 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CDH3P22223 AC121334.1-201ENST00000396414 802 ntBASIC6.86□□□□□ -1.31
CDH3P22223 AL451061.1-201ENST00000407887 862 ntBASIC6.86□□□□□ -1.31
CDH3P22223 MIR1204-201ENST00000408388 67 ntBASIC6.86□□□□□ -1.31
CDH3P22223 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.86□□□□□ -1.31
CDH3P22223 AK3P5-201ENST00000432033 519 ntBASIC6.86□□□□□ -1.31
CDH3P22223 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 AL356133.1-201ENST00000444762 372 ntBASIC6.86□□□□□ -1.31
CDH3P22223 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 NUCKS1P1-201ENST00000452067 703 ntBASIC6.86□□□□□ -1.31
CDH3P22223 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 RN7SL149P-201ENST00000465197 281 ntBASIC6.86□□□□□ -1.31
CDH3P22223 RPS16P9-201ENST00000477220 427 ntBASIC6.86□□□□□ -1.31
CDH3P22223 RN7SL88P-201ENST00000480166 299 ntBASIC6.86□□□□□ -1.31
CDH3P22223 RN7SL849P-201ENST00000485236 295 ntBASIC6.86□□□□□ -1.31
CDH3P22223 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 AL135933.1-201ENST00000498657 802 ntBASIC6.86□□□□□ -1.31
CDH3P22223 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms