Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A1P20908 Z97989.1-201ENST00000531702 2421 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 RNA5SP433-201ENST00000364491 114 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
COL5A1P20908 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.5□□□□□ -1.37
COL5A1P20908 AC108479.1-201ENST00000431142 427 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AL391987.1-201ENST00000441025 200 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.5□□□□□ -1.37
COL5A1P20908 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A1P20908 OR52H2P-201ENST00000514607 902 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AC027308.1-201ENST00000517993 110 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 AL845552.1-201ENST00000556820 323 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AC023827.2-201ENST00000566880 1061 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AL365223.1-201ENST00000574864 1297 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.5□□□□□ -1.37
COL5A1P20908 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A1P20908 AL355974.1-201ENST00000618896 1708 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 OR52B5P-204ENST00000641744 3467 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC6.49□□□□□ -1.37
COL5A1P20908 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.49□□□□□ -1.37
COL5A1P20908 SNORA38B-201ENST00000363524 131 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 RNU1-55P-201ENST00000365510 158 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 AC092865.3-201ENST00000425390 1026 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 AC069154.1-201ENST00000432914 542 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.49□□□□□ -1.37
COL5A1P20908 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.49□□□□□ -1.37
COL5A1P20908 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.49□□□□□ -1.37
COL5A1P20908 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.49□□□□□ -1.37
COL5A1P20908 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.49□□□□□ -1.37
COL5A1P20908 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.49□□□□□ -1.37
COL5A1P20908 AL135999.3-201ENST00000610501 812 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 SNORA16A-202ENST00000628458 135 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.49□□□□□ -1.37
COL5A1P20908 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.49□□□□□ -1.37
COL5A1P20908 KARSP1-201ENST00000451871 1752 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 USP13-203ENST00000496897 2747 ntTSL 2 BASIC6.49□□□□□ -1.37
COL5A1P20908 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 AC096992.2-201ENST00000609553 1684 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.49□□□□□ -1.37
COL5A1P20908 AC104837.1-201ENST00000444644 1587 ntBASIC6.49□□□□□ -1.37
COL5A1P20908 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A1P20908 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL5A1P20908 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL5A1P20908 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL5A1P20908 AC003045.1-201ENST00000398779 713 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL5A1P20908 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.48□□□□□ -1.37
COL5A1P20908 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.48□□□□□ -1.37
COL5A1P20908 AL929472.1-201ENST00000417484 429 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 VN1R20P-201ENST00000425215 966 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 AC115283.1-201ENST00000427353 400 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL5A1P20908 RARRES2P3-201ENST00000457739 473 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 AC084754.1-201ENST00000463466 464 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.48□□□□□ -1.37
COL5A1P20908 RN7SL177P-201ENST00000476596 299 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 RPL7AP23-201ENST00000482625 776 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL5A1P20908 SCARNA5-201ENST00000516201 276 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.48□□□□□ -1.37
COL5A1P20908 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.48□□□□□ -1.37
COL5A1P20908 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL5A1P20908 AC133552.4-201ENST00000576103 676 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.48□□□□□ -1.37
COL5A1P20908 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.48□□□□□ -1.37
COL5A1P20908 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.48□□□□□ -1.37
COL5A1P20908 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL5A1P20908 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL5A1P20908 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL5A1P20908 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC6.48□□□□□ -1.37
COL5A1P20908 AKAP17BP-201ENST00000431706 2719 ntBASIC6.48□□□□□ -1.37
COL5A1P20908 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms