Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.32□□□□□ -1.4
SPTA1P02549 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SPTA1P02549 PPIAP26-201ENST00000377951 522 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 PRELID1P1-201ENST00000403549 660 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 RPL12P23-201ENST00000405880 490 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 VN1R66P-201ENST00000412929 916 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.32□□□□□ -1.4
SPTA1P02549 RPS3P2-201ENST00000421346 701 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.32□□□□□ -1.4
SPTA1P02549 AP000805.1-201ENST00000471604 784 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.32□□□□□ -1.4
SPTA1P02549 AC079866.1-201ENST00000534985 1220 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 NXPE2P1-201ENST00000543705 726 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.32□□□□□ -1.4
SPTA1P02549 AC026458.1-201ENST00000564330 438 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 GLYATL1P2-202ENST00000588046 902 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 AC023513.1-201ENST00000604396 691 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 AL122023.1-201ENST00000622847 530 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.32□□□□□ -1.4
SPTA1P02549 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.32□□□□□ -1.4
SPTA1P02549 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SPTA1P02549 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC6.32□□□□□ -1.4
SPTA1P02549 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.32□□□□□ -1.4
SPTA1P02549 IPO7P2-201ENST00000451446 1750 ntBASIC6.32□□□□□ -1.4
SPTA1P02549 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.32□□□□□ -1.4
SPTA1P02549 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SPTA1P02549 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC6.32□□□□□ -1.4
SPTA1P02549 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.31□□□□□ -1.4
SPTA1P02549 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 MTHFD2P5-201ENST00000320415 844 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 RNA5SP178-201ENST00000410380 128 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 UQCRHP1-204ENST00000424609 274 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 PTMAP1-205ENST00000455552 325 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 RN7SL37P-201ENST00000490461 307 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.31□□□□□ -1.4
SPTA1P02549 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.31□□□□□ -1.4
SPTA1P02549 AC096708.2-201ENST00000577676 512 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 AL357153.4-201ENST00000620487 1016 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SPTA1P02549 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 AC016582.1-202ENST00000636341 2982 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.31□□□□□ -1.4
SPTA1P02549 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 RN7SKP107-201ENST00000364157 290 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 AL035422.1-201ENST00000414193 397 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.31□□□□□ -1.4
SPTA1P02549 AC092017.2-201ENST00000427600 362 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 UBBP5-201ENST00000446970 266 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 Z83838.1-202ENST00000456225 839 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 RPS26P39-201ENST00000469206 341 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.31□□□□□ -1.4
SPTA1P02549 AC112484.3-201ENST00000505910 329 ntBASIC6.31□□□□□ -1.4
SPTA1P02549 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.31□□□□□ -1.4
SPTA1P02549 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.31□□□□□ -1.4
SPTA1P02549 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC6.31□□□□□ -1.4
SPTA1P02549 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPTA1P02549 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
SPTA1P02549 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.3□□□□□ -1.4
SPTA1P02549 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 FAM204BP-201ENST00000369171 701 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SPTA1P02549 MIR1178-201ENST00000408396 91 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 RN7SKP293-201ENST00000411389 296 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 AC079355.1-201ENST00000421770 223 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.3□□□□□ -1.4
SPTA1P02549 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms