Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AL034372.1-201ENST00000407586 754 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 FDPSP6-201ENST00000425091 512 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 LDHAP2-201ENST00000437325 985 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 OR51P1P-201ENST00000447547 942 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC092824.1-201ENST00000483524 576 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 RNA5SP422-201ENST00000516778 111 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AP003499.1-201ENST00000527217 574 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 CRADD-210ENST00000552033 622 ntTSL 3 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 OR4N3P-201ENST00000559395 818 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC005495.1-201ENST00000586611 1211 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AL354718.1-201ENST00000619764 589 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC012653.2-201ENST00000621880 420 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC135068.4-201ENST00000622949 925 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC005785.2-201ENST00000624655 631 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC127071.1-201ENST00000624997 712 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC011471.4-201ENST00000638271 216 ntBASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RBFOX3A6NFN3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 AL512353.3-201ENST00000417517 1326 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 AL109918.1-202ENST00000406724 436 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 RPS26P38-201ENST00000414476 348 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 AC097721.1-201ENST00000427150 1253 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 NPM1P25-201ENST00000429734 854 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 DDX11L10-201ENST00000430178 571 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 CRYGGP-201ENST00000443337 145 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 MGAT2P1-201ENST00000449718 797 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 PRELID1P3-201ENST00000450055 643 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 RN7SL587P-201ENST00000459853 281 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 GAPDHP31-201ENST00000509325 1014 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 IGHV3-57-201ENST00000520143 280 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 OR52K3P-201ENST00000531655 943 ntBASIC5.35□□□□□ -1.55
RBFOX3A6NFN3 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 482.7 ms