Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AL132656.3-201ENST00000606384 1595 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 RN7SKP1-201ENST00000365525 307 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 CYP4F34P-201ENST00000425951 481 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 NDUFB4P1-201ENST00000462398 381 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 RPL5P12-201ENST00000477071 851 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 MIR4685-201ENST00000578185 69 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 GTF2IP6-201ENST00000583143 541 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC111186.1-201ENST00000604684 130 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC100810.3-201ENST00000633189 2240 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC083806.2-201ENST00000617795 2685 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 AC007114.2-201ENST00000576014 4281 ntBASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RHBDD3Q9Y3P4 PABPC1P8-201ENST00000452851 2086 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AC016251.2-201ENST00000623393 3089 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 RNA5SP172-201ENST00000365061 118 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 MIR152-201ENST00000385212 87 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 RNA5SP177-201ENST00000410122 107 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 EIF4A1P13-201ENST00000415667 230 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 DUTP4-201ENST00000424782 475 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 MYO5BP3-201ENST00000431872 1279 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 DBIL5P2-201ENST00000443827 253 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AC019080.2-201ENST00000453859 394 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 EEF1B2P2-201ENST00000519625 676 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AC012065.3-201ENST00000602736 439 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AC063962.1-201ENST00000608199 521 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 FRG2MP-201ENST00000613317 856 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 AC125232.1-201ENST00000452554 1408 ntBASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDD3Q9Y3P4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms