Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 SNORD115-48-201ENST00000364764 76 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 TERF1P4-201ENST00000399580 1115 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 RNU2-5P-201ENST00000410533 180 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 RN7SKP261-201ENST00000410948 278 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 MTCO1P21-201ENST00000416634 589 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC017104.2-201ENST00000417000 321 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 VN1R31P-201ENST00000417498 730 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC000362.1-201ENST00000433725 425 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL512882.1-201ENST00000436086 832 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 MTCYBP29-201ENST00000436327 1006 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 NPM1P33-201ENST00000438918 872 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 OR2L9P-201ENST00000444456 913 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL096829.2-201ENST00000446582 742 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 C1DP3-201ENST00000455013 423 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 RPS18P13-201ENST00000461260 454 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AP002371.1-201ENST00000463604 433 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 RPL34P22-201ENST00000468193 318 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC108475.1-201ENST00000507880 950 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC108157.1-201ENST00000510511 539 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC074087.1-201ENST00000512059 724 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC113352.1-201ENST00000513196 666 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC090415.1-201ENST00000581877 847 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC005771.1-201ENST00000585581 349 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL353807.4-201ENST00000604995 257 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC067838.1-201ENST00000606064 577 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC069499.2-201ENST00000610665 382 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC104237.3-201ENST00000611809 427 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC068234.2-201ENST00000619646 522 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC096708.4-201ENST00000620563 552 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 AC119674.1-209ENST00000642031 997 ntBASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SSBP3Q9BWW4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 AP000766.1-201ENST00000561746 4140 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 XRCC6P2-201ENST00000457831 1822 ntBASIC6.41□□□□□ -1.38
SSBP3Q9BWW4 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms