Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL034399.1-201ENST00000451535 380 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 PGBD4P1-201ENST00000473644 407 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AC095057.1-201ENST00000507583 168 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AP003084.1-201ENST00000524828 742 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 MIR4800-201ENST00000537353 80 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AC090971.3-201ENST00000557871 1041 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AL049840.6-202ENST00000603373 279 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AC107905.1-201ENST00000616204 426 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AC012629.3-201ENST00000623397 328 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AC233968.1-201ENST00000611212 1300 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AL669831.5-218ENST00000591702 1873 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 RN7SKP62-201ENST00000384539 329 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC121334.1-201ENST00000396414 802 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AL451061.1-201ENST00000407887 862 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 RPL17P17-201ENST00000419491 557 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC009500.1-201ENST00000420684 583 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 RBMY3AP-201ENST00000449381 1145 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC018639.1-201ENST00000492994 442 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 OR4N3P-201ENST00000559395 818 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC023827.2-201ENST00000566880 1061 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC027506.1-201ENST00000621395 198 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC135068.4-201ENST00000622949 925 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 RPSAP68-201ENST00000625020 438 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 TEX41-271ENST00000628213 993 ntTSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC087269.2-201ENST00000641764 975 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AL139254.2-202ENST00000641937 1156 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 OR7E161P-202ENST00000641994 1033 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 SSXP3-201ENST00000442971 1300 ntBASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.44□□□□□ -1.06
CHMP4CQ96CF2 AC079178.2-201ENST00000439323 1624 ntBASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC8.43□□□□□ -1.06
CHMP4CQ96CF2 AC097523.2-201ENST00000435551 652 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms