Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
FREM3P0C091 RNA5SP382-201ENST00000363355 112 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 E2F6P3-201ENST00000441743 743 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 COX4I1P2-201ENST00000447446 547 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.21□□□□□ -1.42
FREM3P0C091 AC005165.2-201ENST00000466070 380 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.21□□□□□ -1.42
FREM3P0C091 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.21□□□□□ -1.42
FREM3P0C091 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.21□□□□□ -1.42
FREM3P0C091 AC068408.1-201ENST00000577406 1144 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 AC138207.8-204ENST00000579588 527 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.21□□□□□ -1.42
FREM3P0C091 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.21□□□□□ -1.42
FREM3P0C091 AL035410.2-201ENST00000604963 864 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.21□□□□□ -1.42
FREM3P0C091 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 AC004241.2-201ENST00000614562 444 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 AC010333.3-201ENST00000615100 402 ntBASIC6.21□□□□□ -1.42
FREM3P0C091 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.21□□□□□ -1.42
FREM3P0C091 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
FREM3P0C091 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
FREM3P0C091 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FREM3P0C091 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.21□□□□□ -1.42
FREM3P0C091 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.21□□□□□ -1.42
FREM3P0C091 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 AC020978.6-201ENST00000571197 3177 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.2□□□□□ -1.42
FREM3P0C091 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC013403.1-201ENST00000436954 263 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.2□□□□□ -1.42
FREM3P0C091 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC236972.4-201ENST00000458091 963 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.2□□□□□ -1.42
FREM3P0C091 RN7SL502P-201ENST00000481857 290 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 RPL29P23-201ENST00000486188 442 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 AC026826.1-201ENST00000493002 361 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 SNX18P23-201ENST00000510867 677 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 IGKV2D-38-201ENST00000518423 240 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.2□□□□□ -1.42
FREM3P0C091 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.2□□□□□ -1.42
FREM3P0C091 MIR4428-201ENST00000584884 73 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 SNORD96A-201ENST00000606577 79 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
FREM3P0C091 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
FREM3P0C091 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.2□□□□□ -1.42
FREM3P0C091 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.2□□□□□ -1.42
FREM3P0C091 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.2□□□□□ -1.42
FREM3P0C091 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
FREM3P0C091 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 RPL7AP51-201ENST00000422016 760 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 AL589794.1-201ENST00000424971 390 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 RPEP4-201ENST00000437636 602 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC106800.2-201ENST00000514009 1103 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.2□□□□□ -1.42
FREM3P0C091 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.2□□□□□ -1.42
FREM3P0C091 AC139493.1-201ENST00000604368 397 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 AL451064.2-201ENST00000623514 1654 ntBASIC6.2□□□□□ -1.42
FREM3P0C091 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.2□□□□□ -1.42
FREM3P0C091 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FREM3P0C091 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms