Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 EIF4EP5-201ENST00000528228 640 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 PPIAP14-201ENST00000577627 496 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 MIR3157-201ENST00000578688 85 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC111186.1-201ENST00000604684 130 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 AL590032.1-201ENST00000604920 252 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC092953.2-201ENST00000608000 699 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC123769.2-201ENST00000624332 5984 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC010401.2-201ENST00000575137 4934 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 RNA5SP474-201ENST00000391234 90 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC240504.1-201ENST00000395709 845 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 RN7SKP232-201ENST00000410170 290 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AL773545.3-201ENST00000414297 706 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 RPL6P21-201ENST00000418672 846 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 AKR1D1P1-201ENST00000457236 936 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC083806.1-201ENST00000468934 316 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 RPS14P8-201ENST00000478778 369 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 RN7SL741P-201ENST00000482473 289 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC021146.11-201ENST00000503319 491 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC022616.2-201ENST00000523185 300 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 SNRPCP6-201ENST00000528310 210 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 OR9G2P-201ENST00000533326 880 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 MIR4732-201ENST00000581873 76 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 WBP1LP11-201ENST00000586141 328 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC012175.1-201ENST00000603755 531 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AL035410.2-201ENST00000604963 864 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC019257.2-201ENST00000605539 497 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC006328.2-201ENST00000623198 397 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC012005.2-201ENST00000624333 397 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 ZNF806-201ENST00000438300 1774 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 AC217777.1-201ENST00000570034 1471 ntBASIC8.11□□□□□ -1.11
HLA-DOAP06340 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-DOAP06340 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-DOAP06340 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 AL162456.1-201ENST00000634535 2006 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 UBTFL2-201ENST00000411859 1191 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 AC244452.1-201ENST00000413798 141 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-DOAP06340 AC099340.1-201ENST00000475247 599 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 AC131233.1-201ENST00000479200 955 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 RN7SL187P-201ENST00000495587 303 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 RN7SL649P-201ENST00000496974 275 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 AC140063.1-201ENST00000541343 259 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 MIR6780B-201ENST00000610307 79 ntBASIC8.1□□□□□ -1.11
HLA-DOAP06340 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.1□□□□□ -1.11
HLA-DOAP06340 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms