Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.28□□□□□ -1.24
APOEP02649 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.28□□□□□ -1.24
APOEP02649 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.28□□□□□ -1.24
APOEP02649 CASP1P2-201ENST00000526830 1258 ntBASIC7.28□□□□□ -1.24
APOEP02649 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.28□□□□□ -1.24
APOEP02649 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.28□□□□□ -1.24
APOEP02649 MIR3159-201ENST00000584572 74 ntBASIC7.28□□□□□ -1.24
APOEP02649 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.28□□□□□ -1.24
APOEP02649 AC012065.3-201ENST00000602736 439 ntBASIC7.28□□□□□ -1.24
APOEP02649 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC7.28□□□□□ -1.24
APOEP02649 AC073263.3-201ENST00000624449 858 ntBASIC7.28□□□□□ -1.24
APOEP02649 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.28□□□□□ -1.24
APOEP02649 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
APOEP02649 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
APOEP02649 CUBNP3-201ENST00000457461 1784 ntBASIC7.28□□□□□ -1.24
APOEP02649 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
APOEP02649 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
APOEP02649 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.27□□□□□ -1.24
APOEP02649 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.27□□□□□ -1.24
APOEP02649 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
APOEP02649 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
APOEP02649 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
APOEP02649 CDY19P-201ENST00000411668 1613 ntBASIC7.27□□□□□ -1.25
APOEP02649 CDY18P-201ENST00000438294 1609 ntBASIC7.27□□□□□ -1.25
APOEP02649 AP000641.1-201ENST00000531988 1639 ntBASIC7.27□□□□□ -1.25
APOEP02649 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
APOEP02649 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
APOEP02649 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
APOEP02649 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
APOEP02649 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.27□□□□□ -1.25
APOEP02649 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
APOEP02649 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
APOEP02649 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.27□□□□□ -1.25
APOEP02649 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.27□□□□□ -1.25
APOEP02649 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.27□□□□□ -1.25
APOEP02649 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
APOEP02649 MIR640-201ENST00000385086 96 ntBASIC7.27□□□□□ -1.25
APOEP02649 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
APOEP02649 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.27□□□□□ -1.25
APOEP02649 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.27□□□□□ -1.25
APOEP02649 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.27□□□□□ -1.25
APOEP02649 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.27□□□□□ -1.25
APOEP02649 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.27□□□□□ -1.25
APOEP02649 AC007365.2-201ENST00000428806 458 ntBASIC7.27□□□□□ -1.25
APOEP02649 AC114402.2-201ENST00000432760 643 ntBASIC7.27□□□□□ -1.25
APOEP02649 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.27□□□□□ -1.25
APOEP02649 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.27□□□□□ -1.25
APOEP02649 AL034399.1-201ENST00000451535 380 ntBASIC7.27□□□□□ -1.25
APOEP02649 AP000805.1-201ENST00000471604 784 ntBASIC7.27□□□□□ -1.25
APOEP02649 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.27□□□□□ -1.25
APOEP02649 RPL5P11-201ENST00000498068 893 ntBASIC7.27□□□□□ -1.25
APOEP02649 IGLVV-66-201ENST00000523818 341 ntBASIC7.27□□□□□ -1.25
APOEP02649 RBMS2P1-201ENST00000525031 1226 ntBASIC7.27□□□□□ -1.25
APOEP02649 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.27□□□□□ -1.25
APOEP02649 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.27□□□□□ -1.25
APOEP02649 ACTG1P15-201ENST00000570019 1063 ntBASIC7.27□□□□□ -1.25
APOEP02649 WDR45BP1-201ENST00000583470 1029 ntBASIC7.27□□□□□ -1.25
APOEP02649 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.27□□□□□ -1.25
APOEP02649 AC011447.2-201ENST00000592921 283 ntBASIC7.27□□□□□ -1.25
APOEP02649 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
APOEP02649 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.27□□□□□ -1.25
APOEP02649 OR2A3P-202ENST00000641249 1776 ntBASIC7.27□□□□□ -1.25
APOEP02649 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.27□□□□□ -1.25
APOEP02649 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
APOEP02649 MAPK10-323ENST00000641493 3207 ntBASIC7.27□□□□□ -1.25
APOEP02649 AC007993.1-201ENST00000621298 2430 ntBASIC7.27□□□□□ -1.25
APOEP02649 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.27□□□□□ -1.25
APOEP02649 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.27□□□□□ -1.25
APOEP02649 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.26□□□□□ -1.25
APOEP02649 Z93929.1-201ENST00000418200 1475 ntBASIC7.26□□□□□ -1.25
APOEP02649 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.26□□□□□ -1.25
APOEP02649 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
APOEP02649 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 MIR187-201ENST00000385062 109 ntBASIC7.26□□□□□ -1.25
APOEP02649 OR52N3P-201ENST00000413417 934 ntBASIC7.26□□□□□ -1.25
APOEP02649 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.26□□□□□ -1.25
APOEP02649 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.26□□□□□ -1.25
APOEP02649 PHB2P1-201ENST00000434943 890 ntBASIC7.26□□□□□ -1.25
APOEP02649 AC027124.1-201ENST00000440852 466 ntBASIC7.26□□□□□ -1.25
APOEP02649 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.26□□□□□ -1.25
APOEP02649 AL133480.2-201ENST00000456723 487 ntBASIC7.26□□□□□ -1.25
APOEP02649 PGBD4P1-201ENST00000473644 407 ntBASIC7.26□□□□□ -1.25
APOEP02649 RN7SL868P-201ENST00000485915 303 ntBASIC7.26□□□□□ -1.25
APOEP02649 RPS4XP23-201ENST00000487801 237 ntBASIC7.26□□□□□ -1.25
APOEP02649 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC7.26□□□□□ -1.25
APOEP02649 SUMO2P7-201ENST00000511179 285 ntBASIC7.26□□□□□ -1.25
APOEP02649 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms