Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 CDY10P-201ENST00000452415 1567 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC022306.1-201ENST00000560489 1562 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC090774.4-201ENST00000578888 1372 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 RNA5SP114-201ENST00000363780 113 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AL713922.1-201ENST00000416477 747 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 FECHP1-201ENST00000431896 1214 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 RN7SL456P-201ENST00000469290 295 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC063943.2-201ENST00000495697 534 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC100854.1-201ENST00000520351 341 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AP001646.2-201ENST00000528645 1156 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AP006587.5-201ENST00000532033 739 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 PDCL3P1-201ENST00000534575 734 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC091768.1-201ENST00000609258 930 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 OR1N1-202ENST00000619659 939 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC007347.2-201ENST00000623044 180 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC026108.1-201ENST00000635444 547 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 AC110597.1-201ENST00000562669 3176 ntBASIC7.12□□□□□ -1.27
PCDH9Q9HC56 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDH9Q9HC56 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 RPL24P4-201ENST00000326586 421 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 RNU12-2P-201ENST00000364789 156 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 RNA5SP53-201ENST00000391299 120 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AL662791.3-201ENST00000413771 776 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 RPSAP60-201ENST00000415403 880 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 RPL6P21-201ENST00000418672 846 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 OSTCP2-201ENST00000437956 444 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 GAPDHP53-201ENST00000458397 924 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AP000805.1-201ENST00000471604 784 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AC068522.1-201ENST00000482895 345 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AL135978.1-201ENST00000553618 1266 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 FAM30C-201ENST00000561158 410 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.11□□□□□ -1.27
PCDH9Q9HC56 FXYD6P1-201ENST00000604857 285 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AL121782.1-201ENST00000611242 413 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 RN7SL126P-201ENST00000616400 299 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AL161420.1-201ENST00000619393 264 ntBASIC7.11□□□□□ -1.27
PCDH9Q9HC56 AC103564.3-201ENST00000621194 220 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms