Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC010998.3-201ENST00000613871 631 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC090506.2-201ENST00000624521 419 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 SAMMSON-214ENST00000641395 1264 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 OR5AU1-204ENST00000641822 1197 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 KYNUP1-201ENST00000466683 1406 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CDY10P-201ENST00000452415 1567 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 MROH3P-201ENST00000435735 2676 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
AMBRA1Q9C0C7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 RN7SKP36-201ENST00000363997 312 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 MIR431-201ENST00000385266 114 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AL589655.1-201ENST00000405398 482 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC009413.1-201ENST00000414823 399 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 EEF1GP7-201ENST00000422983 703 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 RPL6P2-201ENST00000425480 783 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC092646.1-201ENST00000427142 901 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC009299.1-201ENST00000429684 717 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 RPSAP62-201ENST00000432596 833 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 ATP5LP4-201ENST00000434169 307 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 PMS2P9-201ENST00000441237 515 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC011742.2-201ENST00000443818 352 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 TCEAL4P1-201ENST00000453620 588 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 OR7E62P-201ENST00000456741 477 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 MTCYBP14-201ENST00000457471 715 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC093827.1-201ENST00000480094 861 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC023818.1-201ENST00000498379 384 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC119751.4-201ENST00000507498 357 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 MTATP6P9-201ENST00000515039 680 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 BCAS2P1-201ENST00000528022 632 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC244034.2-201ENST00000562504 509 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 RN7SL697P-201ENST00000582484 299 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AL031429.2-201ENST00000602605 649 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AL355333.1-201ENST00000605632 279 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC087072.2-201ENST00000621060 682 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 Z93929.1-201ENST00000418200 1475 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AC022613.3-201ENST00000560740 1346 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms