Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 CTAGE11P-201ENST00000451540 2353 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 NPM1P31-201ENST00000399021 764 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 SNORA81-201ENST00000408493 178 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 MYO5BP3-201ENST00000431872 1279 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 FTLP17-201ENST00000432567 525 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 RPL14P5-201ENST00000436474 730 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 FCF1P7-201ENST00000451185 558 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 RPL34P34-201ENST00000465389 354 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 RPSAP48-201ENST00000466509 889 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 TECRP2-201ENST00000503270 928 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AP001803.1-201ENST00000525668 147 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 HNRNPCP8-201ENST00000528764 888 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AC010615.3-201ENST00000597319 394 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AC015849.6-201ENST00000605454 474 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AC012511.1-201ENST00000608140 449 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AC103798.2-201ENST00000624292 632 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AC069542.2-201ENST00000624816 216 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF812P-201ENST00000457674 1694 ntBASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC104837.1-201ENST00000444644 1587 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 RNU12-2P-201ENST00000364789 156 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 FAM204CP-201ENST00000424489 642 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 OR51P1P-201ENST00000447547 942 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC135721.2-201ENST00000464237 300 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC010409.2-201ENST00000505780 478 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC100854.1-201ENST00000520351 341 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 ACTG1P15-201ENST00000570019 1063 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 IGLJCOR18-201ENST00000584002 424 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC092032.1-201ENST00000603090 165 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AL161420.1-201ENST00000619393 264 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC011471.4-201ENST00000638271 216 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AL449283.1-201ENST00000602631 3403 ntBASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP3Q96JB5 AC020978.6-201ENST00000571197 3177 ntBASIC7.87□□□□□ -1.15
CDK5RAP3Q96JB5 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms