Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
UBCP0CG48 AC120057.5-201ENST00000623840 154 ntBASIC6.09□□□□□ -1.43
UBCP0CG48 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.09□□□□□ -1.43
UBCP0CG48 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.09□□□□□ -1.43
UBCP0CG48 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
UBCP0CG48 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
UBCP0CG48 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.09□□□□□ -1.43
UBCP0CG48 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
UBCP0CG48 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
UBCP0CG48 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
UBCP0CG48 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
UBCP0CG48 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.09□□□□□ -1.43
UBCP0CG48 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
UBCP0CG48 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.09□□□□□ -1.43
UBCP0CG48 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
UBCP0CG48 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
UBCP0CG48 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
UBCP0CG48 AL449283.1-201ENST00000602631 3403 ntBASIC6.09□□□□□ -1.44
UBCP0CG48 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
UBCP0CG48 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
UBCP0CG48 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
UBCP0CG48 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
UBCP0CG48 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
UBCP0CG48 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.09□□□□□ -1.44
UBCP0CG48 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.08□□□□□ -1.44
UBCP0CG48 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.44
UBCP0CG48 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 RNA5SP333-201ENST00000363466 118 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 RNA5SP334-201ENST00000364825 118 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.08□□□□□ -1.44
UBCP0CG48 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.08□□□□□ -1.44
UBCP0CG48 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 CYCSP44-201ENST00000448560 313 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.08□□□□□ -1.44
UBCP0CG48 AC016489.1-201ENST00000461109 375 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 RPL23AP8-201ENST00000479812 475 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.08□□□□□ -1.44
UBCP0CG48 AC063943.2-201ENST00000495697 534 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AC011352.2-201ENST00000514574 1016 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 SCARNA6-201ENST00000515982 265 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 RN7SKP64-201ENST00000517206 328 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.08□□□□□ -1.44
UBCP0CG48 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.08□□□□□ -1.44
UBCP0CG48 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
UBCP0CG48 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.08□□□□□ -1.44
UBCP0CG48 RN7SL25P-201ENST00000583862 260 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AC067852.5-201ENST00000589299 310 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AP001120.4-201ENST00000590231 108 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.08□□□□□ -1.44
UBCP0CG48 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC6.08□□□□□ -1.44
UBCP0CG48 AC091768.1-201ENST00000609258 930 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 AC016542.3-201ENST00000623520 619 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AC016542.2-201ENST00000624201 619 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.08□□□□□ -1.44
UBCP0CG48 FGL2-202ENST00000637771 989 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 AC011471.4-201ENST00000638271 216 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 OR7E161P-202ENST00000641994 1033 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
UBCP0CG48 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.08□□□□□ -1.44
UBCP0CG48 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
UBCP0CG48 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
UBCP0CG48 AL356361.1-201ENST00000400943 1459 ntBASIC6.08□□□□□ -1.44
UBCP0CG48 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
UBCP0CG48 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
UBCP0CG48 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
UBCP0CG48 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.07□□□□□ -1.44
UBCP0CG48 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.07□□□□□ -1.44
UBCP0CG48 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
UBCP0CG48 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
UBCP0CG48 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.07□□□□□ -1.44
UBCP0CG48 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.07□□□□□ -1.44
UBCP0CG48 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
UBCP0CG48 AL451142.1-201ENST00000375867 775 ntBASIC6.07□□□□□ -1.44
UBCP0CG48 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
UBCP0CG48 OR7E91P-201ENST00000400027 866 ntBASIC6.07□□□□□ -1.44
UBCP0CG48 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.07□□□□□ -1.44
UBCP0CG48 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
UBCP0CG48 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC6.07□□□□□ -1.44
UBCP0CG48 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.07□□□□□ -1.44
UBCP0CG48 RN7SL228P-201ENST00000470060 303 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms