Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
UBE4BO95155 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 AL451064.2-201ENST00000623514 1654 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
UBE4BO95155 CDY3P-201ENST00000454543 1618 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE4BO95155 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
UBE4BO95155 RPL24P4-201ENST00000326586 421 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 SNORA70G-201ENST00000383923 142 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 MIR431-201ENST00000385266 114 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 RNA5SP35-201ENST00000391257 129 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 AC068138.1-201ENST00000412635 217 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 RPS14P4-201ENST00000415880 418 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 PHB2P1-201ENST00000434943 890 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE4BO95155 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.53□□□□□ -1.2
UBE4BO95155 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE4BO95155 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE4BO95155 MEF2AP1-201ENST00000454867 863 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 BZW1P1-201ENST00000454901 1240 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 RN7SL382P-201ENST00000482631 282 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 AC117395.1-201ENST00000487390 403 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 AC087752.2-201ENST00000521219 281 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 AC021820.1-201ENST00000525564 808 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.53□□□□□ -1.2
UBE4BO95155 AL135978.1-201ENST00000553618 1266 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 AC073857.1-201ENST00000625082 1054 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
UBE4BO95155 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE4BO95155 AC083806.2-201ENST00000617795 2685 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.53□□□□□ -1.2
UBE4BO95155 AC096992.2-201ENST00000609553 1684 ntBASIC7.53□□□□□ -1.2
UBE4BO95155 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
UBE4BO95155 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
UBE4BO95155 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE4BO95155 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE4BO95155 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
UBE4BO95155 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
UBE4BO95155 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
UBE4BO95155 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
UBE4BO95155 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC027124.1-201ENST00000440852 466 ntBASIC7.52□□□□□ -1.2
UBE4BO95155 AL158214.1-201ENST00000444423 404 ntBASIC7.52□□□□□ -1.2
UBE4BO95155 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.52□□□□□ -1.2
UBE4BO95155 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.52□□□□□ -1.2
UBE4BO95155 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC122713.1-201ENST00000518368 1015 ntBASIC7.52□□□□□ -1.2
UBE4BO95155 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.52□□□□□ -1.2
UBE4BO95155 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC069240.2-201ENST00000550242 609 ntBASIC7.52□□□□□ -1.2
UBE4BO95155 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
UBE4BO95155 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.52□□□□□ -1.2
UBE4BO95155 MIR4428-201ENST00000584884 73 ntBASIC7.52□□□□□ -1.2
UBE4BO95155 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.52□□□□□ -1.2
UBE4BO95155 AL353807.4-201ENST00000604995 257 ntBASIC7.52□□□□□ -1.2
UBE4BO95155 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.52□□□□□ -1.2
UBE4BO95155 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.52□□□□□ -1.2
UBE4BO95155 AC006453.3-201ENST00000635891 377 ntBASIC7.52□□□□□ -1.2
UBE4BO95155 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
UBE4BO95155 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE4BO95155 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE4BO95155 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE4BO95155 CLCA3P-203ENST00000490028 2781 ntBASIC7.52□□□□□ -1.21
UBE4BO95155 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
UBE4BO95155 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE4BO95155 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
UBE4BO95155 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
UBE4BO95155 KYNUP2-201ENST00000582280 1329 ntBASIC7.52□□□□□ -1.21
UBE4BO95155 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE4BO95155 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE4BO95155 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE4BO95155 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
UBE4BO95155 MAPK10-344ENST00000641718 3746 ntBASIC7.52□□□□□ -1.21
UBE4BO95155 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE4BO95155 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE4BO95155 AC008171.1-201ENST00000395058 200 ntBASIC7.52□□□□□ -1.21
UBE4BO95155 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
UBE4BO95155 AC096537.2-201ENST00000413707 714 ntBASIC7.52□□□□□ -1.21
UBE4BO95155 RPL6P21-201ENST00000418672 846 ntBASIC7.52□□□□□ -1.21
UBE4BO95155 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms