Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FO082842.1-201ENST00000423552 1370 ntBASIC5.28□□□□□ -1.56
HLA-DRB4X5D2U9 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.28□□□□□ -1.56
HLA-DRB4X5D2U9 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DRB4X5D2U9 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
HLA-DRB4X5D2U9 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DRB4X5D2U9 AL355377.1-201ENST00000621125 1653 ntBASIC5.28□□□□□ -1.56
HLA-DRB4X5D2U9 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DRB4X5D2U9 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 GOT2P1-201ENST00000440922 1309 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 RPL10P16-201ENST00000325000 645 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 U3.14-201ENST00000365363 227 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 MIR152-201ENST00000385212 87 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 RPS3AP5-201ENST00000389400 821 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 CYP4F34P-201ENST00000425951 481 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 PMS2P9-201ENST00000441237 515 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC092421.1-201ENST00000448148 418 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AL034399.1-201ENST00000451535 380 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC019080.2-201ENST00000453859 394 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 SNORA35.1-201ENST00000458908 128 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 WBP1LP1-201ENST00000460451 896 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 MYL6P4-201ENST00000477911 453 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 RPS4XP23-201ENST00000487801 237 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 OR5M4P-201ENST00000529436 925 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 ULK4P1-202ENST00000565174 503 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 COX6CP16-201ENST00000603667 216 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 AL352984.2-201ENST00000611153 546 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 JAML-213ENST00000640745 951 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF658B-201ENST00000602828 3408 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 OLMALINC-203ENST00000641087 3779 ntBASIC5.27□□□□□ -1.57
HLA-DRB4X5D2U9 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 CDY5P-201ENST00000411487 1580 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 CDY9P-201ENST00000451397 1580 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 MARK2P4-201ENST00000503381 2380 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AL080312.1-201ENST00000256654 824 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms