Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 UGT2B27P-201ENST00000505092 1620 ntBASIC7.15□□□□□ -1.27
PCDH9Q9HC56 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 AC129502.1-201ENST00000623261 1654 ntBASIC7.15□□□□□ -1.27
PCDH9Q9HC56 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDH9Q9HC56 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 AC021220.1-201ENST00000507445 630 ntBASIC7.14□□□□□ -1.27
PCDH9Q9HC56 AC011352.2-201ENST00000514574 1016 ntBASIC7.14□□□□□ -1.27
PCDH9Q9HC56 SCARNA18.2-201ENST00000516882 84 ntBASIC7.14□□□□□ -1.27
PCDH9Q9HC56 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.14□□□□□ -1.27
PCDH9Q9HC56 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 AC092032.1-201ENST00000603090 165 ntBASIC7.14□□□□□ -1.27
PCDH9Q9HC56 AC137695.1-201ENST00000604126 489 ntBASIC7.14□□□□□ -1.27
PCDH9Q9HC56 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH9Q9HC56 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 PABPC1P8-201ENST00000452851 2086 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 RN7SKP55-201ENST00000364888 307 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 RN7SKP47-201ENST00000365347 328 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 SOD1P1-201ENST00000407803 440 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 SNORA11D-201ENST00000408548 128 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 SNORA11E-201ENST00000408778 128 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 RN7SKP117-201ENST00000410175 264 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC239800.1-201ENST00000442049 719 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 RPS4XP19-201ENST00000460237 736 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 RPSAP48-201ENST00000466509 889 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 CBX5P1-201ENST00000468470 561 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC023818.1-201ENST00000498379 384 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 IGKV1D-32-201ENST00000517449 318 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 OR5M6P-201ENST00000530227 937 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 RN7SL689P-201ENST00000577215 297 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH9Q9HC56 CYCSP1-201ENST00000604815 315 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AL512413.1-201ENST00000606489 382 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC122710.3-201ENST00000606566 541 ntBASIC7.13□□□□□ -1.27
PCDH9Q9HC56 AC087894.3-201ENST00000623682 349 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms