Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.03□□□□□ -1.44
SSX3Q99909 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.03□□□□□ -1.44
SSX3Q99909 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SSX3Q99909 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 AP000432.2-201ENST00000624164 2048 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 AC110597.1-201ENST00000562669 3176 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
SSX3Q99909 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SSX3Q99909 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 PWRN1-212ENST00000569908 1435 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 AL078621.1-201ENST00000272567 768 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 RN7SKP63-201ENST00000363187 301 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSX3Q99909 MIR498-201ENST00000385134 124 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 NUS1P4-201ENST00000401550 585 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 RN7SKP131-201ENST00000410698 301 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 TAS2R2P-201ENST00000421146 910 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SSX3Q99909 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 NIP7P1-201ENST00000433227 512 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX3Q99909 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 MGAT2P1-201ENST00000449718 797 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 OR52I1-201ENST00000450052 1050 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 RPL5P15-201ENST00000475870 897 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 MTCO1P55-201ENST00000489829 745 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 GOLGA5P1-201ENST00000507317 980 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.03□□□□□ -1.44
SSX3Q99909 AC022616.2-201ENST00000523185 300 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.03□□□□□ -1.44
SSX3Q99909 AC068631.3-201ENST00000538831 225 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 IGLJCOR18-201ENST00000584002 424 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.03□□□□□ -1.44
SSX3Q99909 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 AL031429.2-201ENST00000602605 649 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 FRG2MP-201ENST00000613317 856 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 pRNA.9-201ENST00000618609 89 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 RN7SL680P-201ENST00000620379 299 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 AC106795.5-201ENST00000623288 454 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSX3Q99909 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.03□□□□□ -1.44
SSX3Q99909 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.03□□□□□ -1.44
SSX3Q99909 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.03□□□□□ -1.44
SSX3Q99909 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSX3Q99909 AL353795.1-201ENST00000439134 1775 ntBASIC6.03□□□□□ -1.44
SSX3Q99909 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.03□□□□□ -1.44
SSX3Q99909 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
SSX3Q99909 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.44
SSX3Q99909 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.02□□□□□ -1.44
SSX3Q99909 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
SSX3Q99909 OR4C1P-202ENST00000641065 1569 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 RNA5SP396-201ENST00000364834 120 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SSX3Q99909 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.02□□□□□ -1.45
SSX3Q99909 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX3Q99909 AL645936.2-201ENST00000430565 928 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX3Q99909 VN1R96P-201ENST00000446052 858 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 AL390026.1-201ENST00000456647 457 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 RN7SL791P-201ENST00000467868 295 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.02□□□□□ -1.45
SSX3Q99909 NPY6R-201ENST00000503807 1112 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 AC055733.3-201ENST00000505214 523 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX3Q99909 AC138409.2-202ENST00000507274 458 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SSX3Q99909 AC103855.4-201ENST00000533158 265 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms